Evidence map›Paper›PMID 41601632›Full record

ArticleFrontiers in immunology2025

Single-cell transcriptomics reveals a novel mechanism of RDH16 regulating immune infiltration in hepatocellular carcinoma.

Zhenzhen Zhang, Rui Fan, Jing Ma, Dehui Li, Yan Jiang, Fahui Liu, Qiming Gong

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Zhenzhen Zhang *Department of Pathology, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.
Rui Fan *Department of Pathology, Hangzhou Linping Hospital of Traditional Chinese Medicine, Hangzhou, Zhejiang, China.
Jing Ma *Department of Nephrology, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China.
Dehui LiDepartment of Nephrology, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China.
Yan JiangDepartment of Nephrology, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China.
Fahui LiuSchool of Medicine, Xiamen University, Xiamen, China.
Qiming GongDepartment of Nephrology, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Hepatocellular carcinoma (HCC) exhibits pronounced intratumoral heterogeneity and a complex immune microenvironment, which together limit therapeutic efficacy. Identifying actionable biomarkers and mechanisms of immune modulation remains critical for improving patient outcomes. Method: We integrated single-cell RNA sequencing data with bulk transcriptomic datasets to comprehensively characterize tumor cell heterogeneity and immune landscape features in HCC. Associations between RDH16 expression and clinicopathological characteristics were evaluated, and in vitro functional assays were conducted. Mendelian randomization analyses were performed to assess causal relationships. Results: RDH16 expression was significantly reduced in HCC tissues compared with non-tumor liver tissues and was associated with vascular invasion, elevated alpha-fetoprotein levels, poor tumor differentiation, and advanced T stage. Higher RDH16 expression was consistently associated with improved overall prognosis. Functional assays indicated that RDH16 did not directly affect tumor cell proliferation, migration, or invasion. Notably, RDH16 expression was inversely correlated with infiltration of CD163⁺ M2 macrophages, suggesting a potential immunomodulatory role in the tumor microenvironment. Mendelian randomization analyses further supported a protective effect of higher RDH16 expression against HCC risk. Discussion: These findings identify RDH16 as an immune-modulating biomarker in HCC, highlighting its potential role in shaping the tumor immune microenvironment and suggesting new avenues for personalized immunotherapeutic strategies.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsTranscriptomeBiomarkers, TumorCell Line, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMacrophagesMalePrognosisSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisTumor MicroenvironmentBiomarkers, Tumorhepatocellular carcinomaimmuneinfiltrationRDH16single-cell transcriptomicstumor microenvironment

Identifiers

PMID41601632
PMCPMC12832884

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.