Evidence map›Paper›PMID 41597714›Full record

ArticleMicroorganisms2026

Long-Read Metagenomics Profiling for Identification of Key Microorganisms Affected by Heavy Metals at Technogenic Zones.

Iskander Isgandarov, Zhanar Abilda, Rakhim Kanat, Dias Daurov, Zagipa Sapakhova, Ainash Daurova, Kabyl Zhambakin, Dmitriy Volkov, Abylay Begaly, Malika Shamekova

Abstract read
In one paragraph

Article in Microorganisms, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Iskander IsgandarovInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0009-0001-4386-3303
Zhanar AbildaInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0001-8505-5243
Rakhim KanatInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0009-0009-2418-5920
Dias DaurovInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0003-3073-4577
Zagipa SapakhovaInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0002-8007-5066
Ainash DaurovaInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0001-7949-9112
Kabyl ZhambakinInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0001-5243-145X
Dmitriy VolkovInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0003-4609-7912
Abylay BegalyInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0009-0009-2848-336X
Malika ShamekovaInstitute of Plant Biology and Biotechnology, Almaty 050040, Kazakhstan.ORCID 0000-0002-8746-7484

Funding

Ministry of Agriculture of the Republic of Kazakhstan BR24992837
6 · The paper itself

Abstract

Heavy metal pollution poses a serious threat to soil ecosystems worldwide, as long-term exposure can alter microbial community functioning and reduce overall ecosystem resilience. This study investigated the impact of heavy metal contamination in technogenic industrial areas of the East Kazakhstan Region on soil microbial communities. Soil samples were collected for chemical and metagenomic analyses. Concentrations of Zn, Pb, Cu, and Cd were quantified by flame atomic absorption spectrometry (FAAS). Using long-read whole-metagenome nanopore sequencing, we conducted strain-level profiling of soils with different levels of metal contamination. This approach provided high-resolution taxonomic data, enabling detailed characterization of microbial community structure. Heavy metal exposure did not significantly reduce microbial diversity or richness but influences the quality of community composition. Metal-resistant taxa dominated contaminated soils. Overall, the results highlight the value of long-read sequencing for resolving strain-level responses to environmental contamination.

Indexed as

heavy metal contaminationlong-read sequencingmetagenomicssoil microbial communitywhole metagenome sequencing

Identifiers

PMID41597714
PMCPMC12843729

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.