Evidence map›Paper›PMID 41594842›Full record

ArticleBiology2026

Reply to Pastore, E.P. Comment on "Korkmaz et al. A Deep Learning and Explainable AI-Based Approach for the Classification of Discomycetes Species.

Aras Fahrettin Korkmaz, Fatih Ekinci, Şehmus Altaş, Eda Kumru, Mehmet Serdar Güzel, Ilgaz Akata

Abstract readComment
In one paragraph

Article in Biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aras Fahrettin KorkmazFaculty of Health Sciences Nutrition, Dietetics Department, Şirinevler Campus, İstanbul Kültür University, Istanbul 34191, Türkiye.ORCID 0000-0002-3827-3018
Fatih EkinciInstitute of Artificial Intelligence, Ankara University, Ankara 06100, Türkiye.ORCID 0000-0002-1011-1105
Şehmus AltaşDepartment of Computer Engineering, Faculty of Engineering, Ankara University, Ankara 06830, Türkiye.
Eda KumruGraduate School of Natural and Applied Sciences, Ankara University, Ankara 06830, Türkiye.
Mehmet Serdar GüzelDepartment of Computer Engineering, Faculty of Engineering, Ankara University, Ankara 06830, Türkiye.ORCID 0000-0002-3408-0083
Ilgaz AkataDepartment of Biology, Faculty of Science, Ankara University, Ankara 06100, Türkiye.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The comment raises three principal themes: (i) safeguarding statistical independence through grouping at the level of specimen/collector/site prior to splitting, (ii) preventing selection bias via fully nested preprocessing and hyperparameter tuning, and (iii) assessing shortcut learning and reporting probability calibration for decision thresholding in ecological workflows [...].

Identifiers

PMID41594842
PMCPMC12837491

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.