Evidence map›Paper›PMID 41593474›Full record

ArticleBMC genomics2026

Codon usage bias and selective constraints in Gentianales mitogenomes.

Sara Getachew Amenu, Liao Yiying, Oyetola Oyebanji, Girma Eshetu, Ann Wanjiru Mwaniki, Wan Tao

Abstract read
In one paragraph

Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Characterization ofEcology and evolution · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sara Getachew AmenuKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, 430074, Hubei, PR China. sara@wbgcas.cn.
Liao YiyingUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
Oyetola OyebanjiBotanical Research Institute of Texas, Fort Worth, TX, USA.
Girma EshetuEthiopian Biodiversity Institute, Addis Ababa, Ethiopia.
Ann Wanjiru MwanikiKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, 430074, Hubei, PR China.
Wan TaoKey Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, 430074, Hubei, PR China. wantao@wbgcas.cn.

Funding

National Natural Science Foundation of China 584763SN:38173276
6 · The paper itself

Abstract

Mitochondrial genome evolution(MGE) in flowering plants is quasi-intertwined-dynamic. MGE is driven via mutational pressures, translational selection, and functional constraints. However, unveiling the intra- and inter-genomic interplay governing evolutionary drives remains challenging. We investigate MGE-dynamic across twelve Gentianales species, revealing distinct codon usage patterns influenced by opposing evolutionary forces. While the first and second codon positions are highly conserved, the third codon positions show significant variability (27.7% - 45.8%), reflecting diverse selective pressures. Multi-dimensional analyses, including ENc-GC3s plots, neutrality plots, and PR2 bias, indicate that natural selection predominantly governs codon usage, outweighing mutational biases. Key findings include, non-significant correlations between GC12 and GC3 (R

Indexed as

Codon UsageGenome, MitochondrialMagnoliopsidaSelection, GeneticBase CompositionCodonEvolution, MolecularMutationCodonCodon usage biasdN/dSGentianalesMitogenomesMutation–selection

Identifiers

PMID41593474
PMCPMC12918352

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.