Evidence map›Paper›PMID 41592912›Full record

ArticleRMD open2026

Transcriptomic and proteomic analysis stratifies patients with axial spondyloarthritis based on disease activity, structural damage and radiographic progression.

Laura Cuesta-López, Iván Arias-de la Rosa, Carlos Pérez-Sánchez, Ariana Barbera-Betancour, Miriam Ruiz-Ponce, Antonio Manuel Barranco, Pedro Ortiz-Buitrago, Lourdes Ladehesa-Pineda, María Ángeles Puche-Larrubia, Jesus Eduardo Martín-Salazar and 7 more

Abstract read
In one paragraph

Article in RMD open, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Laura Cuesta-LópezUniversity of Córdoba, Córdoba, Spain.
Iván Arias-de la RosaDepartment of Gastroenterology, Hospital General de Tomelloso, Tomelloso, Spain.ORCID 0000-0002-1145-4935
Carlos Pérez-SánchezUniversity of Córdoba, Córdoba, Spain.
Ariana Barbera-BetancourUniversity of Cambridge, Cambridge, UK.
Miriam Ruiz-PonceUniversity of Córdoba, Córdoba, Spain.
Antonio Manuel BarrancoUniversity of Córdoba, Córdoba, Spain.
Pedro Ortiz-BuitragoUniversity of Córdoba, Córdoba, Spain.
Lourdes Ladehesa-PinedaUniversity of Córdoba, Córdoba, Spain.
María Ángeles Puche-LarrubiaUniversity of Córdoba, Córdoba, Spain.ORCID 0000-0002-1526-0978
Jesus Eduardo Martín-SalazarUniversity of Córdoba, Córdoba, Spain.
Elena Moreno-CañoUniversity of Córdoba, Córdoba, Spain.
María Carmen Ábalos-AguileraUniversity of Córdoba, Córdoba, Spain.
Chary Lopez-PedreraUniversity of Córdoba, Córdoba, Spain.
Alejandro Escudero-ContrerasUniversity of Córdoba, Córdoba, Spain.
Eduardo Collantes-EstévezUniversity of Córdoba, Córdoba, Spain.
Clementina López-MedinaUniversity of Córdoba, Córdoba, Spain.ORCID 0000-0002-2309-5837
Nuria BarbarrojaUniversity of Córdoba, Córdoba, Spain barbarrojan@gmail.com.ORCID 0000-0002-0962-6072

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo identify clusters of highly correlated genes enriched in biological functions and specific molecular pathways involved in the pathogenesis of radiographic damage in axial spondyloarthritis (axSpA) and to discover molecular biomarkers of radiographic progression and disease severity.

methodsA total of 144 patients with axSpA were included. First, RNA from peripheral blood mononuclear cells was sequenced in a cohort of 24 patients with axSpA. Hub genes were measured in a n=60 validation cohort through microfluidic PCR. A 5-year follow-up enabled the classification of the patients into fast/moderate or slow progressors. Machine learning approaches were applied to identify a predictive biomarker of progression by integrating gene expression data with clinical variables. An independent cohort of 60 patients with axSpA, with spine radiographs taken 5 years prior, underwent serum proteomic analysis using a Proximity Extension Assay.

resultsUnsupervised clustering analysis using transcriptomics revealed two distinct groups of patients with axSpA, differentiated by their clinical profiles. Weight gene correlation network analysis identified six gene modules differentially expressed between the two clusters. Patients in cluster 2 exhibited higher disease activity, greater functional impairment and more structural damage. Molecular alterations linked to structural damage revealed a specific circulating inflammatory proteome profile associated with disease severity. A predictive model composed of two genes and basal total modified Stoke Ankylosing Spondylitis Spinal Score emerged as a key biomarker for identifying moderate-to-fast radiographic progression.

conclusionsThis study identified molecular pathways involved in radiographic damage and discovered potential proteomic biomarkers of disease severity and transcriptomic predictors of radiographic progression in axSpA.

Indexed as

Axial SpondyloarthritisGene Expression ProfilingProteomeProteomicsTranscriptomeAdultBiomarkersComputational BiologyDisease ProgressionFemaleHumansMaleMiddle AgedRadiographySeverity of Illness IndexBiomarkersProteomeAxial SpondyloarthritisBiomarkersInflammationMachine Learning

Identifiers

PMID41592912
PMCPMC12853446

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.