Evidence map›Paper›PMID 41592600›Full record

ArticleClinical and molecular hepatology2026

FOXM1 influences DNA methylation to augment TACC3 alternative splicing directed by KAT2A in hepatocellular carcinoma.

Li Na Zhao, Jesper B Andersen

Abstract read
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Article in Clinical and molecular hepatology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genes · 2026
    Article
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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Li Na ZhaoDepartment of Health and Medical Sciences, Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark.
Jesper B AndersenDepartment of Health and Medical Sciences, Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark.

Funding

Danish Cancer Society R167-A10784Danish Cancer Society R278-A16638Danish Cancer Society R98-A6446Independent Research Fund Denmark for Medical Research 1030-00070BIndependent Research Fund Denmark for Medical Research 4183-00118ANovo Nordisk Foundation 0058419Novo Nordisk Foundation 0085704Novo Nordisk Foundation 220C0074956
6 · The paper itself

Abstract

BACKGROUND/

aimsHepatocellular carcinoma (HCC) is characterized by profound transcriptomic dysregulation, yet the mechanism(s) by which DNA methylation is coordinated with chromatin modifications to regulate alternative splicing during tumorigenesis remains poorly understood.

methodsUsing prospectively paired multi-omics data obtained from metabolic dysfunction-associated steatotic liver disease (MASLD)-HCC patients and coupled with a premalignant MASLD cohort, we have uncovered a previously unrecognized gene-regulatory axis centered on TACC3 isoform-switching.

resultsIn the non-tumoral context, the TACC3-201 isoform directly engages the histone acetyltransferase KAT2A to coordinate the regulation of NOTCH4 signaling. In HCC, this regulatory axis is disrupted whereby FOXM1 overrides DNMT1-mediated methylation, upregulating TACC3, and decoupling TACC3 from the KAT2A-associated NOTCH4 co-expression module. This rewiring is licensing tumor-specific cell-cycle progression and epigenetic plasticity. Thus, FOXM1 reshapes the TACC3-KAT2A interaction, while DNMT1 drives context-dependent DNA methylation, activating the CDK1-inhibitory kinase PKMYT1.

conclusionsWe uncovered TACC3-KAT2A as an emerging regulatory axis caused by alternative splicing in HCC and propose FOXM1-driven TACC3 inhibition to synergistically disrupt mitotic fidelity and transcriptional regulation, potentially offering new therapeutic avenues for HCC with reduced toxicity to the normal liver.

Indexed as

Alternative SplicingCarcinoma, HepatocellularDNA MethylationForkhead Box Protein M1Histone AcetyltransferasesLiver NeoplasmsMicrotubule-Associated ProteinsCell Line, TumorDNA (Cytosine-5-)-Methyltransferase 1Gene Expression Regulation, NeoplasticHumansProtein IsoformsSignal TransductionDNA (Cytosine-5-)-Methyltransferase 1DNMT1 protein, humanForkhead Box Protein M1FOXM1 protein, humanHistone AcetyltransferasesMicrotubule-Associated ProteinsProtein IsoformsAlternative splicingFOXM1Hepatocellular carcinomaKAT2ATACC3

Identifiers

PMID41592600
PMCPMC13129773

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.