Evidence map›Paper›PMID 41586495›Full record

ArticleAntimicrobial agents and chemotherapy2026

Prediction of genetic relatedness of

Amanda C Carroll, Leanne Mortimer, Hiren Ghosh, Sandra Reuter, Hajo Grundmann, Karel Brinda, William P Hanage, Angel Li, Aimee Paterson, Andrew Purssell and 7 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Amanda C CarrollThe Ottawa Hospital Research Institute, Ottawa, Ontario, Canada.ORCID 0000-0001-5941-744X
Leanne MortimerChildren's Hospital of Eastern Ontario Research Institute, Ottawa, Ontario, Canada.
Hiren GhoshMedical Center - University of Freiburg, Freiburg, Germany.
Sandra ReuterMedical Center - University of Freiburg, Freiburg, Germany.ORCID 0000-0003-1672-5789
Hajo GrundmannMedical Center - University of Freiburg, Freiburg, Germany.
Karel BrindaInria, Irisa, Univ. Rennes, Rennes, France.
William P HanageHarvard T.H Chan School of Public Health, Harvard University, Cambridge, Massachusetts, USA.
Angel LiSinai Health System, Toronto, Ontario, Canada.
Aimee PatersonSinai Health System, Toronto, Ontario, Canada.
Andrew PurssellThe Ottawa Hospital Research Institute, Ottawa, Ontario, Canada.
Ashley M RooneyInstitute of Medical Microbiology, University of Zurich, Zurich, Switzerland.
Noelle R YeeUniversity Health Network, Toronto, Ontario, Canada.
Bryan CoburnUniversity Health Network, Toronto, Ontario, Canada.
Shola Able-ThomasMRC Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul, Gambia.
Martin AntonioMRC Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul, Gambia.
Allison McGeerSinai Health System, Toronto, Ontario, Canada.
Derek R MacFaddenThe Ottawa Hospital Research Institute, Ottawa, Ontario, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying the genetic relatedness of resistant bacterial pathogens in healthcare settings can help identify undetected transmission events and outbreaks. However, current methods are time- and resource-intensive. We evaluated a rapid neighbor typing method paired with long-read sequencing for assessment of genetic relatedness. Utilizing a data set of primary clinical samples and published isolate data from two outbreaks of

Indexed as

Escherichia coliEscherichia coli InfectionsDisease OutbreaksGenome, BacterialHumansgenetic relatednessgenomicsmetagenomicsnanoporeoutbreak detectionrapid diagnostics

Identifiers

PMID41586495
PMCPMC12959140

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.