Evidence map›Paper›PMID 41584679›Full record

ArticleFrontiers in plant science2025

Integrated metabolomic and transcriptomic profiling elucidates the tissue-specific biosynthesis and regulation of flavonoids in

Xiao Zhang, Changying Xia, Huan Zhang, Wenqiao Li, Zhe Zhang, Nana Long, Renxiu Yao, Jian Li, Hongping Deng

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Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Xiao ZhangSchool of Life Sciences, Southwest University, Chongqing, China.
Changying XiaSchool of Life Sciences, Southwest University, Chongqing, China.
Huan ZhangSchool of Life Sciences, Southwest University, Chongqing, China.
Wenqiao LiSchool of Life Sciences, Southwest University, Chongqing, China.
Zhe ZhangSchool of Life Sciences, Southwest University, Chongqing, China.
Nana LongSchool of Life Sciences, Southwest University, Chongqing, China.
Renxiu YaoSchool of Life Sciences, Southwest University, Chongqing, China.
Jian LiSchool of Life Sciences, Southwest University, Chongqing, China.
Hongping DengSchool of Life Sciences, Southwest University, Chongqing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Methods: This multi-omics study revealed the specific accumulation pattern of flavonoids in the tissues of Results: A total of 425 flavonoid compounds and 35,671 differentially expressed genes were detected. Further screening revealed 41 structural genes encoding 19 key enzymes (including PAL, CHS, FLS, UGTs, etc.), among which two UGTs (Cluster-69292 and Cluster-71935) were subcellularly localized to the cytoplasm. Furthermore, the weighted gene co-expression network analysis (WGCNA) revealed four key modules exhibiting strong correlations with flavonoid content. From these modules, four core transcription factors (TFs) from the MYB and bHLH families were identified as putative regulators of flavonoid biosynthesis. Discussion: Our findings offer the first comprehensive model of tissue-specific flavonoid accumulation in

Indexed as

biosynthetic pathwayflavonoidsMachilus nanmumetabolomicstranscription factorstranscriptome

Identifiers

PMID41584679
PMCPMC12823935

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.