Evidence map›Paper›PMID 41580587›Full record

ArticleBMC microbiology2026

Longitudinal analysis of gut bacterial and fungal dynamics after solid organ transplantation.

Kristýna Fiedorová, Hana Obručová, Hana Grombiříková, Martina Vaněrková, Eva Blaštíková, Soňa Štěpánková, Libuše Husová, Tomáš Freiberger

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kristýna FiedorováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Hana ObručováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Hana GrombiříkováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Martina VaněrkováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Eva BlaštíkováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Soňa ŠtěpánkováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Libuše HusováCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia.
Tomáš FreibergerCentre for Cardiovascular Surgery and Transplantation, Brno, Czechia. tomas.freiberger@cktch.cz.

Funding

Masarykova Univerzita MUNI/A/1716/2024the Centre of Cardiovascular and Transplantation Surgery (CKTCH) IG 201802the European Union, Next Generation EU Programme EXCELES, ID Project No. LX22NPO5104the Ministry of Education, Youth and Sports of the Czech Republic e-INFRA CZ (ID:90254)
6 · The paper itself

Abstract

backgroundSolid-organ transplantation and related medical treatments can significantly alter the gut microbiome. While disruptions in bacterial communities (dysbiosis) have been associated with infections, rejection, and increased mortality in transplant recipients, research on gut fungal communities (the mycobiome) remains limited. To our knowledge, no study has yet concurrently characterized the bacterial and fungal microbiota or quantified the fungal load longitudinally in patients following solid-organ transplantation. This study aimed to describe temporal changes in these microbial communities and explore associations with clinical outcomes.

resultsWe analysed the gut microbiota dynamics in 21 solid-organ transplant recipients and 10 healthy volunteers across six timepoints, processing 184 samples using both bacterial (16 S rRNA) and fungal (ITS) amplicon sequencing. Bacterial diversity significantly decreased shortly after transplantation but partially recovered during the later post-transplant phase. In contrast, fungal diversity was consistently lower after transplantation and showed greater temporal variability. Quantitative PCR revealed a transient increase in the fungal load at approximately two weeks post-transplant, which was negatively correlated with bacterial diversity. Patients who experienced clinical complications presented reduced microbial richness, especially during the early post-transplant period. Additionally, we identified correlations between selected fungal taxa and bacterial genera previously linked to dysbiosis, suggesting potential interkingdom interactions that may influence microbiome dynamics after transplantation.

conclusionsOur study provides a longitudinal overview of both bacterial and fungal microbiota following solid-organ transplantation. The association between fungal load and bacterial diversity indicates possible interkingdom interactions affecting microbiome recovery, but the clinical implications remain to be elucidated. These findings highlight the importance of including fungal communities alongside bacterial microbiota in future research and clinical monitoring.

Indexed as

BacteriaFungiGastrointestinal MicrobiomeMycobiomeOrgan TransplantationAdultAgedDysbiosisFecesFemaleHumansLongitudinal StudiesMaleMiddle AgedRNA, Ribosomal, 16SRNA, Ribosomal, 16S16S rRNA sequencingFungal loadGut microbiomeITS sequencingMycobiomeSolid organ transplantation

Identifiers

PMID41580587
PMCPMC12910945

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.