Evidence map›Paper›PMID 41579217›Full record

ArticleMolecular biology reports2026

Optimising the method to develop spheroids from MDA-MB-468 human triple negative breast cancer cells.

Shaza M Mohamedahmed, Muhamad Noor Alfarizal Kamarudin, Premdass Ramdas, Usha Sundralingam, Ammu K Radhakrishnan

Abstract read
In one paragraph

Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shaza M MohamedahmedJeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Sunway, 475000, Selangor, Malaysia.
Muhamad Noor Alfarizal KamarudinJeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Sunway, 475000, Selangor, Malaysia.
Premdass RamdasJeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Sunway, 475000, Selangor, Malaysia.
Usha SundralingamSchool of Pharmacy, Monash University Malaysia, Sunway, 47500, Selangor, Malaysia.
Ammu K RadhakrishnanJeffrey Cheah School of Medicine and Health Sciences, Monash University Malaysia, Bandar Sunway, Sunway, 475000, Selangor, Malaysia. ammu.radhakrishnan@monash.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThree-dimensional (3D) spheroid models are increasingly used to emulate the tumour microenvironment for preclinical drug screening. This study aimed to optimise and assess spheroid formation from MDA-MB-468 triple-negative breast cancer (TNBC) cells using hanging drop, liquid overlay, and rigid scaffold methods under normal oxygen (NOC) and low oxygen (LOC) culture conditions.

methodsSpheroids were generated and characterised using bright-field microscopy with AnaSP morphometrics (sphericity, solidity, and perimeter). Gene expression of Epithelial-Mesenchymal Transition (EMT), stemness, and hypoxia/angiogenesis markers (CD44, HIF1A, VEGFA, TWIST1, SNAI1, and NES) was quantified using qPCR. The optimised model was further evaluated using field-emission scanning electron microscopy (FE-SEM) and Hoechst fluorescence.

resultsA workflow combining hanging-drop pre-aggregation with ultra-low attachment (ULA) or agarose-coated plates under NOC produced consistent, compact spheroids. Scaffold cultures formed rapidly but showed size variability under NOC and LOC. Across methods, spheroids were less compact, and gene expression patterns deviated from expected hypoxic responses. HIF1A and VEGFA were more highly expressed under NOC, suggesting pseudo-hypoxic signalling and activation of angiogenesis-related pathways. CD44 and TWIST1 were upregulated in most spheroid types, whereas SNAI1 and NES exhibited condition- and method-specific variability.

conclusionSpheroids cultivated under normoxic conditions demonstrated enhanced structural integrity and transcriptional fidelity. Nonetheless, the study identified that the most compact and resilient spheroids were achieved through the use of hanging-drop pre-aggregation combined with ULA-plates under NOC. The enhanced structural integrity and transcriptional fidelity observed in these spheroids make them valuable models for studying cancer biology and drug responses.

Indexed as

Cell Culture TechniquesSpheroids, CellularTriple Negative Breast NeoplasmsCell Culture Techniques, Three DimensionalCell Line, TumorEpithelial-Mesenchymal TransitionFemaleGene Expression Regulation, NeoplasticHumansHypoxia-Inducible Factor 1, alpha SubunitTumor MicroenvironmentVascular Endothelial Growth Factor AHypoxia-Inducible Factor 1, alpha SubunitVascular Endothelial Growth Factor AGene markersSpheroidsTriple-negative breast cancer

Identifiers

PMID41579217
PMCPMC12831690

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.