Evidence map›Paper›PMID 41578150›Full record

ArticleCommunications biology2026

Histone demethylase KDM7A negatively regulates fibrotic macrophage polarization and lung fibrosis progression.

Naofumi Funagura, Tomoaki Koga, Kan Etoh, Seonghyeon Hong, Hidenori Ichiyasu, Yukio Fujijwara, Kei-Ichiro Yasunaga, Shingo Usuki, Ayane Noda, Akihito Sagara and 5 more

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Naofumi Funagura *Department of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.
Tomoaki Koga *Department of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan. tkoga@kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0001-9584-2611
Kan EtohDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0000-0001-6392-089X
Seonghyeon HongDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0009-0007-5367-7882
Hidenori IchiyasuDepartment of Respiratory Medicine, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Yukio FujijwaraDepartment of Cell Pathology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0000-0002-2074-0597
Kei-Ichiro YasunagaLiaison laboratory Research Promotion Center, IMEG, Kumamoto University, Kumamoto, Japan.
Shingo UsukiLiaison laboratory Research Promotion Center, IMEG, Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0000-0002-9959-3322
Ayane NodaDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.
Akihito SagaraDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.
Shinjiro HinoDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan.
Yoshihiro KomoharaDepartment of Cell Pathology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0000-0001-9723-0846
Takuro SakagamiDepartment of Respiratory Medicine, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Toshihiro InoueDepartment of Ophthalmology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.
Mitsuyoshi NakaoDepartment of Medical Cell Biology, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Kumamoto, Japan. mnakao@gpo.kumamoto-u.ac.jp.

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 23K27381, 23H02690, 23K18220, 20K07328MEXT | Japan Society for the Promotion of Science (JSPS) 24K02240
6 · The paper itself

Abstract

Macrophage polarization shapes immune responses in inflammation and fibrosis, yet the epigenetic mechanisms restraining pathogenic states remain unclear. Here, we identify lysine-specific demethylase 7 A (KDM7A) as an epigenetic suppressor of a profibrotic macrophage (Fib-Mac). Using macrophage assays, single-cell RNA sequencing of Kdm7a-knockout mice, and lung tissue from fibrosis patients, we show that Kdm7a loss drives transcriptional and metabolic reprogramming toward Fib-Mac states. Kdm7a-knockout mice exhibit exacerbated bleomycin-induced lung fibrosis with the expansion of Fib-Mac populations. Mechanistically, we identify toll-like receptor 8 (TLR8) as a suppressor of Fib-Mac polarization whose expression is regulated by KDM7A via the repressive mark H3K27me2 at its enhancer. Notably, macrophage Kdm7a and Tlr8 expression declines with age in male mice, consistent with clinical risk patterns. These findings uncover an epigenetic mechanism restraining disease-driving macrophage states and suggest the KDM7A-TLR8 axis as a potential therapeutic target in fibrotic disorders.

Indexed as

Jumonji Domain-Containing Histone DemethylasesMacrophagesPulmonary FibrosisAnimalsBleomycinDisease ProgressionEpigenesis, GeneticHumansLungMaleMiceMice, Inbred C57BLMice, KnockoutBleomycinJumonji Domain-Containing Histone DemethylasesKDM7A protein, human

Identifiers

PMID41578150
PMCPMC12932667

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.