Evidence map›Paper›PMID 41577123›Full record

ArticleJournal of molecular biology2026

Conformations of Linker Histone H1 Bound to Nucleosome Arrays.

Bo Yuan, Subhra Kanti Das, Weilin Wang, Gillian Camacho, Ashok Kumar, Jeffrey J Hayes, Tae-Hee Lee

Abstract read
In one paragraph

Article in Journal of molecular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bo YuanDepartment of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
Subhra Kanti DasDepartment of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
Weilin WangDepartment of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
Gillian CamachoDepartment of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
Ashok KumarDepartment of Biochemistry and Biophysics, Rochester University Medical Center, Rochester, NY 14625, United States.
Jeffrey J HayesDepartment of Biochemistry and Biophysics, Rochester University Medical Center, Rochester, NY 14625, United States. Electronic address: jeffrey_hayes@URMC.Rocheter.edu.
Tae-Hee LeeDepartment of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States. Electronic address: txl18@psu.edu.

Funding

Dynamics of DNA-histone interactionsR35GM148208 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI Tae-Hee Lee · 2023 to 2026
$2.5M
Molecular mechanisms of the core and linker histone tail domains that drive chromatin condensationR35GM149420 · NIGMS · UNIVERSITY OF ROCHESTER · PI Jeffrey J Hayes · 2023 to 2026
$1.6M
NIGMS NIH HHS R35 GM148208NIGMS NIH HHS R35 GM149420
6 · The paper itself

Abstract

Linker histone H1 plays crucial roles in nucleosome compaction and chromatin condensation. The highly basic C-terminal domain (CTD) of H1 interacts strongly with DNA, a critical aspect of its contribution to H1 function. Despite its critical roles in gene packaging in chromatin where nucleosomes are linked as an array, how H1 CTD interacts with nucleosome arrays remain poorly understood. Here we report a single-molecule FRET study of the conformation and conformational dynamics of the CTD of H1 bound to a 12-mer nucleosome array. According to our results, H1 CTDs within a nucleosome array show signs of highly heterogeneous conformations that are overall more extended and dynamic than that bound to a mono-nucleosome. This observation suggests that H1 CTD interacts randomly with two or more DNA linkers across nucleosomes in an array. This suggestion is further supported by our observation that these domains become more condensed and less dynamic as the arrays become less condensed at a lower NaCl concentration. Our results also suggest that histone H3 and H4 acetylation mimetics and tailless H3 result in H1 CTD interacting less with multiple linkers as they induce a less condensed structure of nucleosome arrays, thereby driving H1 CTD back to its own nucleosome. Our data support that H1 CTD interacts non-specifically with DNA linkers that are either local or distal and that modifications of the H3 and H4 tail domains can regulate H1-mediated chromatin condensation at both the nucleosome and nucleosome array levels.

Indexed as

HistonesNucleosomesAcetylationAnimalsChromatinDNAFluorescence Resonance Energy TransferProtein BindingProtein ConformationProtein DomainsChromatinDNAHistonesNucleosomesH1 CTDlinker histonenucleosome arraysingle-molecule FRET

Identifiers

PMID41577123
PMCPMC12969356

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.