Evidence map›Paper›PMID 41576948›Full record

ArticleCell genomics2026

Cellular senescence in human liver under normal aging and cancer.

Alla Karpova, Xiang Li, Chien-Wei Peng, Kelsey L Gallant, Daniel R Rapp, Daniel M Alligood, Andrew J Houston, Alex Park, Andre Luiz N Targino da Costa, Wen-Hung Chou and 29 more

Abstract read
In one paragraph

Article in Cell genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors.

Alla KarpovaDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Xiang LiDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Chien-Wei PengDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Kelsey L GallantDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Daniel R RappDepartment of Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA.
Daniel M AlligoodDepartment of Surgery, Division of Pediatric Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Andrew J HoustonDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Alex ParkDepartment of Surgery, Division of Pediatric Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Andre Luiz N Targino da CostaDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Wen-Hung ChouDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Michael D IglesiaDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
John M HerndonDepartment of Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA.
Kathleen ByrnesDepartment of Pathology and Immunology, Washington University in St. Louis, St. Louis, MO 63110, USA.
Nataly Naser Al DeenDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Preet LalDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA.
Xiangwei FangDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Reyka G JayasingheDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Jeffrey A BlatnikDepartment of Surgery, Section of Minimally Invasive Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
William G HawkinsSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA.
Dominic E SanfordSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA.
J Chris EagonDepartment of Surgery, Section of Minimally Invasive Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Division of General Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Natasha LeighSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Division of Hepatopancreaticobiliary Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Maria Bernadette M DoyleDepartment of Surgery, Division of Abdominal Organ Transplantation, Washington University in St. Louis, St. Louis, MO 63110, USA.
L Michael BruntSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Section of Minimally Invasive Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
William C ChapmanSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Division of Transplant Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Roheena Z PanniSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Division of Hepatopancreaticobiliary Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Darren R CullinanSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Surgery, Division of General Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Sherri R DaviesDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA.
Jun GuoDepartment of Surgery, Division of Pediatric Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Matthew A WyczalkowskiDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.
Michael C WendlDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA; Department of Mechanical Engineering and Materials Science, Washington University in St. Louis, St. Louis, MO 63130, USA.
Hong ZhangDepartment of Pediatrics, University of Massachusetts Medical School, Worcester, MA 01655, USA.
Colin A MartinDepartment of Surgery, Division of Pediatric Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Brad W WarnerDepartment of Surgery, Division of Pediatric Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA.
Milan G ChhedaDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Neurology, Washington University in St. Louis, St. Louis, MO 63130, USA.
Sheila A StewartSiteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Cell Biology and Physiology, Washington University in St. Louis, St. Louis, MO 63110, USA. Electronic address: sheila.stewart@wustl.edu.
Feng ChenDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA. Electronic address: fchen@wustl.edu.
Ryan C FieldsDepartment of Surgery, Washington University in St. Louis, St. Louis, MO 63110, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA. Electronic address: rcfields@wustl.edu.
Li DingDepartment of Medicine, Washington University in St. Louis, St. Louis, MO 63110, USA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA; Siteman Cancer Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Genetics, Washington University in St. Louis, St. Louis, MO 63110, USA. Electronic address: lding@wustl.edu.

Funding

INSTITUTIONAL TRAINING GRANT IN GENOMIC SCIENCET32HG000045 · NHGRI · WASHINGTON UNIVERSITY · PI MICHAEL R BRENT, Barak A Cohen · 1997 to 2026
$8.4M
NHGRI NIH HHS T32 HG000045
6 · The paper itself

Abstract

Cellular senescence, a stress-induced program causing stable cell-cycle arrest, is a hallmark of liver aging, fibrosis, and cancer. However, the cell-type-specific mechanisms, spatial organization, and cancer-associated alterations in the liver remain unclear. We profiled 43 normal human livers spanning ages and fibrosis stages using a single-cell multiome, Xenium spatial transcriptomics, and CODEX, complemented by fibrotic mouse models and 24 colorectal cancer liver metastases. We found CDKN1A+ senescent hepatocytes, fibroblasts, cholangiocytes, and endothelial cells associated with age, liver disease, or cancer. Senescence differed between aged and fibrotic livers, with similar patterns in mice. Spatially, CDKN1A+ hepatocytes localized periportally, while SERPINE1+ aging-associated hepatocytes formed spatial clusters, potentially mediated by Claudins and THBS1. Fibrotic regions contained CXCL12+ senescent fibroblasts interacting with CXCR4+ immune cells. Chemotherapy intensified senescence in hepatocytes by 5-fold relative to aging and led to unique CDKN2A+ populations. Across conditions, senescent cells shared AP-1 activation, pro-inflammatory cytokines, and apoptosis resistance, suggesting therapeutic opportunities.

Indexed as

AgingCellular SenescenceColorectal NeoplasmsLiverLiver NeoplasmsAgedAnimalsCyclin-Dependent Kinase Inhibitor p21FemaleFibroblastsHepatocytesHumansLiver CirrhosisMaleMiceMiddle AgedCDKN1A protein, humanCyclin-Dependent Kinase Inhibitor p21agingCDKN1Achemotherapycolorectal cancerfibrosishepatocytesliverSASPsenescence

Identifiers

PMID41576948
PMCPMC12903365

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.