Evidence map›Paper›PMID 41573894›Full record

ArticlebioRxiv : the preprint server for biology2025

J Hogins, S Mekala, J Resendiz, S Vedula, A Nelapolu, Y Liu, M Ganjali, A Wolfe, P E Zimmern, L Freddolino and 1 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

J HoginsDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0000-0001-6041-7332
S MekalaDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0009-0000-7824-3772
J ResendizDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0009-0007-8270-6558
S VedulaDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0009-0003-8205-5987
A NelapoluDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0009-0008-1577-2317
Y LiuDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0009-0004-4454-9684
M GanjaliDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0000-0001-8803-6443
A WolfeDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Chicago, IL.ORCID 0000-0003-4532-0545
P E ZimmernDepartment of Urology, University of Texas Southwestern Medical Center, Dallas, TX.ORCID 0000-0002-7612-2042
L FreddolinoDepartment of Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI.ORCID 0000-0002-5821-4226
L ReitzerDepartment of Biological Sciences, the University of Texas at Dallas, Richardson, TX.ORCID 0000-0002-4406-6090

Funding

Building a unified framework for understanding bacterial gene regulation and chromosomal architectureR35GM128637 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Lydia Petra Freddolino · 2018 to 2026
$3.6M
NIGMS NIH HHS R35 GM128637
6 · The paper itself

Abstract

UTI involves bacterial growth in the disparate environments of the bladder and within uroepithelial cells. The bladder is a low-nutrient environment that nonetheless supports rapid growth. Phylogenetic group B2

Indexed as

E. coliE. faecalisInterspecies interactionstranscriptomicsurinary tract infectionsuropathogens

Identifiers

PMID41573894
PMCPMC12822689

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.