Evidence map›Paper›PMID 41573873›Full record

ArticlebioRxiv : the preprint server for biology2025

RhlR quorum-sensing receptor ligand sensitivity regulates the differential expression of phenazine genes in

Autumn N Pope, Varun R Bavda, Megan L Schumacher, Alicia G Mendoza, Anne M Stringer, Caleb P Mallery, Anna Czachor, Amanda F Kurtz, Biqing Liang, Xia Ke and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Autumn N Pope
Varun R Bavda
Megan L Schumacher
Alicia G Mendoza
Anne M Stringer
Caleb P Mallery
Anna Czachor
Amanda F Kurtz
Biqing Liang
Xia Ke
Joseph T Wade
Jon E Paczkowski

Funding

Characterization of the mechanisms underpinning quorum sensing progression in Pseudomonas aeruginosaR01GM144361 · NIGMS · WADSWORTH CENTER · PI Jon E Paczkowski · 2022 to 2026
$1.6M
NIGMS NIH HHS R01 GM144361
6 · The paper itself

Abstract

Bacteria control individualistic and group behaviors using a form of cell-cell communication called quorum sensing. Quorum sensing relies on the production of chemical signals called autoinducers and the subsequent detection of those signals by a cognate receptor. Many Gram-negative bacteria use the LuxR-type family of transcription factor receptors that bind to acyl-homoserine lactone autoinducer signals to regulate their function as DNA-binding proteins. A subclass of this family of transcription factor receptors requires their cognate autoinducer to fold and dimerize to bind DNA to regulate gene expression and, thus, traits associated with quorum sensing, such as biofilm formation and virulence factor production. Here, we use a chemical-genetic approach to determine the structural basis for ligand selection by the quorum-sensing receptor RhlR from

Identifiers

PMID41573873
PMCPMC12822593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.