Evidence map›Paper›PMID 41572333›Full record

ArticleJournal of medical case reports2026

Application of microdeletion and microduplication screening in preimplantation genetic testing: a case report.

Maria Katz, Ben Podgursky, Shenglai Li, Qinnan Zhang, Daniel Shapiro, Monica Pasternak, Noor Siddiqui, Funda Suer, Yuntao Xia

Abstract readCase Reports
In one paragraph

Article in Journal of medical case reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Maria KatzOrchid Health, Palo Alto, CA, 94301, USA.
Ben PodgurskyOrchid Health, Palo Alto, CA, 94301, USA.
Shenglai LiOrchid Health, Palo Alto, CA, 94301, USA.
Qinnan ZhangOrchid Health Genomic Lab, 4022 Stirrup Creek Dr, STE312, Durham, NC, 27703, USA.
Daniel ShapiroReproductive Biology Associates, Atlanta, GA, 30342, USA.
Monica PasternakSpring Fertility, San Francisco, CA, 94109, USA.
Noor SiddiquiOrchid Health, Palo Alto, CA, 94301, USA.
Funda SuerOrchid Health Genomic Lab, 4022 Stirrup Creek Dr, STE312, Durham, NC, 27703, USA. funda@orchidhealth.com.
Yuntao XiaOrchid Health Genomic Lab, 4022 Stirrup Creek Dr, STE312, Durham, NC, 27703, USA. yuntao@orchidhealth.com.ORCID http://orcid.org/0000-0002-3011-5859

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMicrodeletions and microduplications are chromosomal variants ranging up to 3 Mb in size. These abnormalities often arise spontaneously and have significant clinical implications, including developmental delay and congenital anomalies. Given the resolution of conventional preimplantation genetic testing for aneuploidy is > 5-10 Mb, these clinically significant abnormalities are missed. This study presents two cases where preimplantation genetic testing-whole genome sequencing successfully identified small, clinically significant abnormalities. CASE PRESENTATION: In the first case, a couple undergoing in vitro fertilization opted to pursue preimplantation genetic testing-whole genome sequencing. Both the female patient (of East Asian ancestry, 32 years old) and the male patient (of European ancestry, 31 years old) did not disclose any history of genetic conditions. A screen of 50 pathogenic microdeletion and microduplication regions was performed in trophectoderm biopsies, identifying a 1.7-Mb microduplication at Xp22.31, linked to seizures, across multiple samples. The female patient later revealed a history of seizures, previously unaware of a genetic cause, highlighting the clinical relevance of this finding. In the second case, a couple of South Asian ancestry (34-year-old female and 36-year-old male) opted to pursue preimplantation genetic testing-whole genome sequencing for targeted screening of a 412-kb duplication on chromosome 10. Since the duplication had originated de novo in the male patient, the patient lacked informative family members for traditional preimplantation genetic testing probe development and was rejected by other preimplantation genetic testing laboratories. However, preimplantation genetic testing-whole genome sequencing successfully accommodated this region, enabling the identification of unaffected embryos.

conclusionPreimplantation genetic testing-whole genome sequencing offers higher chromosomal resolution than conventional preimplantation genetic testing, enabling general microdeletion/duplication screening as well as the detection of difficult chromosomal variations. Patients undergoing in vitro fertilization now have the option to screen for additional clinically relevant conditions and explore family planning solutions for familial complex chromosomal abnormalities.

Indexed as

Chromosome DeletionChromosome DuplicationGenetic TestingPreimplantation DiagnosisAdultFemaleFertilization in VitroHumansMalePregnancyWhole Genome SequencingMicrodeletionMicroduplicationPreimplantation genetic testing–whole genome sequencing

Identifiers

PMID41572333
PMCPMC12910960

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