Evidence map›Paper›PMID 41572145›Full record

ArticleBMC genomics2026

Enhanced soybean salt tolerance and oil content via marker-assisted pyramiding of GmSALT3 and high-oil QTLs.

Caiting Gao, Ligao Bao, Xinyu Yang, Zhigang Li, Peng Liu

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Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

Caiting GaoAgricultural college, Inner Mongolia Minzu University, No. 536, Xilamulun Street, Horqin District, Tongliao City, Inner Mongolia Autonomous Region, 028000, China.
Ligao BaoCollege of Computer Science and Technology, Hardware Teaching and Research Section, Inner Mongolia Minzu University, Tongliao, Inner Mongolia Autonomous Region, 028000, China.
Xinyu YangBaotou Agricultural and Animal Husbandry Science Research Institute, Baotou, Inner Mongolia Autonomous Region, 014060, China.
Zhigang LiDepartment of Agriculture, Hetao College, Yunzhong Street, Linhe District, Bayannur City, 015000, Inner Mongolia Autonomous Region, China. LzhiGang20255@21cn.com.
Peng LiuAgricultural college, Inner Mongolia Minzu University, No. 536, Xilamulun Street, Horqin District, Tongliao City, Inner Mongolia Autonomous Region, 028000, China. LiuPeng20256@163.com.

Funding

Agricultural Biology Inner Mongolia Autonomous Region "Unveiling the Challenge" Project Sub-Project 2023JBGS0006Breeding National Science and Technology Major Project 2023ZD04032Ministry of Agriculture and Rural Affairs Agricultural Science and Technology Major Project Sub-Project NK202308010103
6 · The paper itself

Abstract

objectiveSoil salinity and demand for edible oil are two major challenges facing global soybean production. Traditional breeding approaches often encounter negative correlations between salinity tolerance and seed-quality traits. This study aimed to overcome this trade-off by pyramiding the salt tolerance gene GmSALT3 with multiple oil content quantitative trait loci (QTL) through marker-assisted selection.

methodsUsing a cross between the salt-tolerant line, 2125, and high-oil cultivar Neiminda 3, we developed backcross (BC₃F₅) populations and employed kompetitive allele-specific polymerase chain reaction genotyping for five markers linked to GmSALT3 and three major oil QTL (qOil-5-1, qOil-10-1, qOil-15). A total of 892 BC₃F₂ plants were screened, with 3.8% carrying the complete pyramided genotype.

resultsPhenotypic evaluation revealed successful improvement in both traits: pyramided lines showed a 42.3% reduction in salt injury index under 150-mM NaCl hydroponic stress (F₅,₂₁₀ = 87.3, P < 0.001) and a 2.8% increase in seed oil content compared with the recurrent parent (t₆₈ = 6.84, P < 0.001). Multi-environment trials across two locations (Nanjing: 32°03’N, 118°46’E, pH: 6.8, electrical conductivity [EC]: 1.3 dS/m; Yancheng: 33°23’N, 120°08’E, pH: 7.2, EC: 2.8 dS/m) over 2 years demonstrated stable performance with no yield penalty under non-saline conditions. Trade-off analysis indicated modest positive synergy between traits (r = 0.31, P < 0.05, n = 70), suggesting the potential to mitigate expected negative correlations. Best linear unbiased prediction analysis confirmed genotype stability with minimal genotype–environment interaction (17.5% of total variation, indicating robust performance).

conclusionThis study demonstrates the feasibility of simultaneously improving stress tolerance and quality traits through strategic gene pyramiding, although the relatively low recovery frequency (3.8%) of fully pyramided genotypes highlights technical challenges. The pyramided lines provide valuable germplasm for sustainable soybean production in marginal lands, acknowledging limitations in QTL coverage and the need for broader validation across additional environments.

Indexed as

Glycine maxPlant OilsQuantitative Trait LociSalt ToleranceGenetic MarkersGenotypePhenotypePlant BreedingGenetic MarkersPlant OilsAbiotic stressGene pyramidingGlycine maxQuantitative trait lociSeed qualitySustainable agriculture

Identifiers

PMID41572145
PMCPMC12911286

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.