Evidence map›Paper›PMID 41571614›Full record

ArticleEnvironmental microbiology2026

Comparison of Predatory Phenotypes and Genotypes Between Bdellovibrio sp. BIS2 and Bacteriovorax sp. HI3 Isolated From the Same Freshwater Environment.

Tomomi Sugiyama, Tsubasa Kojima, Naoki A Uemura, Daisuke Nakane, Hideo Dohra, Daisuke Inoue, Michihiko Ike

Abstract readComparative Study
In one paragraph

Article in Environmental microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tomomi SugiyamaDivision of Sustainable Energy and Environmental Engineering, Graduate School of Engineering, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0009-0007-3024-2122
Tsubasa KojimaDivision of Sustainable Energy and Environmental Engineering, Graduate School of Engineering, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0009-0005-4299-1150
Naoki A UemuraDepartment of Engineering Science, The University of Electro-Communications, Tokyo, Japan.ORCID https://orcid.org/0009-0001-2630-9060
Daisuke NakaneDepartment of Engineering Science, The University of Electro-Communications, Tokyo, Japan.ORCID https://orcid.org/0000-0002-8201-2608
Hideo DohraResearch Institute of Green Science and Technology, Shizuoka University, Shizuoka, Japan.ORCID https://orcid.org/0000-0002-3919-3538
Daisuke InoueDivision of Sustainable Energy and Environmental Engineering, Graduate School of Engineering, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0002-9216-8198
Michihiko IkeDivision of Sustainable Energy and Environmental Engineering, Graduate School of Engineering, The University of Osaka, Osaka, Japan.ORCID https://orcid.org/0000-0001-6237-8103

Funding

Institute for Fermentation, Osaka G-2021-3-049Japan Science and Technology Agency JPMJSP2138Japan Society for the Promotion of Science JP24K21902Kurita Water and Environment Foundation 22T009Science and Technology Research Partnership for Sustainable Development JPMJSA2004
6 · The paper itself

Abstract

Bdellovibrio and like organisms (BALOs) are predatory bacteria, which play crucial roles in shaping community structure and maintaining diversity in microbial ecosystems. However, functional and genetic variation among coexisting BALOs remains largely unexplored. Here, we characterised Bdellovibrio sp. BIS2 and Bacteriovorax sp. HI3, which were isolated from the same freshwater environment at different time points. Predation assays and a functional genomic analysis revealed that the predators have distinct prey ranges and predatory behaviours with associated genotypic differences, which may contribute to niche partitioning in the shared habitat. BIS2 possessed an extensive set of flagellar genes, likely contributing to its higher motility and rapid spatial exploration. However, cell debris remained after predation because the prey cells were incompletely lysed. HI3 displayed efficient localised predation and thorough lysis of prey cellular components. The difference in predation efficiency was likely attributed to distinct profiles of hydrolytic enzymes in the two BALOs, including enzymes critical for prey cell lysis and exit from the prey. Genomic regions unique to each predator with predation-associated genes suggest that genetic divergence drove the evolution of specialised predatory properties across BALOs. These findings provide insights into variation in predatory traits among BALOs, a key mechanism enabling coexistence and adaptation.

Indexed as

BdellovibrioPondsProteobacteriaFood ChainPhylogenyBacteriovoraxBdellovibrioBdellovibrio and like organismscomparative genome analysispredation phenotype

Identifiers

PMID41571614
PMCPMC12827227

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.