Evidence map›Paper›PMID 41568918›Full record

ArticleJournal of neuroimaging : official journal of the American Society of Neuroimaging

Explainable Machine-Learning Model to Classify Culprit Calcified Carotid Plaque in Embolic Stroke of Undetermined Source.

Yu Sakai, Jiehyun Kim, Huy Q Phi, Andrew C Hu, Pargol Balali, Konstanze V Guggenberger, John H Woo, Daniel Bos, Scott E Kasner, Brett L Cucchiara and 4 more

Abstract read
In one paragraph

Article in Journal of neuroimaging : official journal of the American Society of Neuroimaging. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Explainable Machine-Learning Model to Classify Culprit Calcified Carotid Plaque in Embolic Stroke of Undetermined Source.Journal of neuroimaging : official journal of the American Society of Neuroimaging
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Yu SakaiDepartment of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0009-0002-0217-1631
Jiehyun KimDepartment of Computer Science, University of Massachusetts Boston, Boston, Massachusetts, USA.
Huy Q PhiDrexel University College of Medicine, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0000-0003-3705-9850
Andrew C HuPerelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Pargol BalaliDepartment of Neurology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Konstanze V GuggenbergerDepartment of Radiology, University of Wuerzburg, Wuerzburg, Germany.
John H WooDepartment of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Daniel BosDepartment of Epidemiology, Erasmus MC University Medical Center, Rotterdam, the Netherlands.
Scott E KasnerDepartment of Neurology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Brett L CucchiaraDepartment of Neurology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Luca SabaDepartment of Radiology, University of Cagliari, Cagliari, Italy.
Zhi HuangDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, US.
Daniel HaehnDepartment of Computer Science, University of Massachusetts Boston, Boston, Massachusetts, USA.
Jae W SongDepartment of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0000-0002-3127-6427

Funding

RESEARCH TRACK RADIOLOGY RESIDENCYT32EB004311 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI Terence P Gade, Misun Hwang · 2005 to 2026
$4.5M
American Heart Association 938082Foundation of the American Society of Neuroradiology 2024 Foundation of ASNR Trainee Research GrantNIBIB NIH HHS NIH/NINIB T-32 grant (EB004311)NIBIB NIH HHS T32 EB004311
6 · The paper itself

Abstract

background and purposeEmbolic stroke of undetermined source (ESUS) may be associated with carotid artery plaques with <50% stenosis. Plaque vulnerability is multifactorial, possibly related to intraplaque hemorrhage (IPH), lipid-rich necrotic core, perivascular adipose tissue (PVAT), and calcifications. Machine learning (ML)-based plaque classification is increasingly popular but often limited in clinical interpretability by black-box nature. We applied an explainable ML approach, using noncalcified plaque components and calcification features with the SHapley Additive exPlanations (SHAP) framework to classify plaques as culprit or nonculprit.

methodsThis was a retrospective, cross-sectional study. Patients with unilateral anterior circulation ESUS with calcified carotid plaques in neck computed tomography (CT) angiography were analyzed. Calcification-level features were derived from manual segmentations. Plaque-level features were assessed by a neuroradiologist and by semi-automated software. Plaques were classified as culprit if ipsilateral to stroke side. Eight classifiers were benchmarked, and a gradient-boosted decision tree (CatBoost) was further tuned. SHAP explained model decisions.

resultsSeventy patients yielded 116 calcified plaques (270 calcifications). Model based on five plaque- and calcification-level features achieved ROC-AUC (receiver operating characteristic area under the curve) 0.79 and precision-recall-AUC 0.86, outperforming classification based on plaque thickness ≥3 mm (ROC-AUC 0.59, p = 0.04) and IPH presence (ROC-AUC 0.51, p = 0.003). SHAP identified plaque thickness and PVAT volume as the most influential features with potential thresholds of >2.6 mm and ≥112 mm

Indexed as

Carotid Artery DiseasesComputed Tomography AngiographyEmbolic StrokeMachine LearningPlaque, AtheroscleroticAgedCalcinosisClassification AlgorithmsCross-Sectional StudiesFemaleHumansMalePredictive Learning ModelsRadiographic Image Interpretation, Computer-AssistedReproducibility of ResultsRetrospective Studiesatherosclerosiscalcificationcomputed tomographymachine learningplaquestroke

Identifiers

PMID41568918
PMCPMC12825938

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.