Evidence map›Paper›PMID 41567210›Full record

ArticleFrontiers in immunology2025

Integrative analysis of bulk and single-cell transcriptomics identifies factors related to immunosuppressive microenvironment to predict unfavorable prognosis in inflammatory breast cancer.

Kexuan Feng, Xiaoduo Li, Xiaoqian Li, Junjie Liu, Rui Zhang, Heyan Chen, Yunpeng Zhang, Jianjun He, Huimin Zhang

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kexuan FengDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Xiaoduo LiDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Xiaoqian LiDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Junjie LiuDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Rui ZhangDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Heyan ChenDepartment of Breast Surgery, Fujian Medical University Union Hospital, Fuzhou, Fujian, China.
Yunpeng ZhangDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Jianjun HeDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
Huimin ZhangDepartment of Breast Surgery, The first Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Inflammatory breast cancer (IBC) is a rare invasive tumor and characterized by the formation of tumor emboli within dermal lymphatic vessels. The tumor microenvironment (TME) is a key factor in IBC aggressiveness, but its heterogeneity and intercellular role remain incompletely understood. Methods: Weighted gene coexpression network analysis (WGCNA) was performed to identify immune infiltration-associated genes. We also depicted cellular communication networks and specific ligand-receptor signaling pathways using the single-cell transcriptomics analysis of IBC and non-IBC samples. Finally, we verified the expression of key proteins by immunohistochemistry. Results: Through the intersection of WGCNA module genes and differentially expressed genes between pathological complete response and residual disease samples, Discussion: This study identifies GZMB and SPP1 as potential immunosuppressive-related prognostic biomarkers in IBC patients, reveals the key role of plasmacytoid dendritic cells in remodeling of immunosuppressive microenvironment in IBC.

Indexed as

Inflammatory Breast NeoplasmsTranscriptomeTumor MicroenvironmentBiomarkers, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansPrognosisSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisBiomarkers, Tumorimmunosuppressive microenvironmentinflammatory breast cancerplasmacytoid dendritic cellsprognostic biomarkersingle-cell transcriptomics

Identifiers

PMID41567210
PMCPMC12816328

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.