Evidence map›Paper›PMID 41566359›Full record

ArticleMicrobiome2026

Commensal microbe-derived butyrate enhances T follicular helper cell function to boost mucosal vaccine efficacy.

Haeun Ko, Chan Johng Kim, Seungyeon Choi, Jaegyun Noh, Seung Won Kim, Juhun Lee, Seohyun Byun, Haena Lee, John Chulhoon Park, Hye Eun Park and 6 more

Abstract read
In one paragraph

Article in Microbiome, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Microorganisms · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Haeun Ko *Department of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Chan Johng Kim *Present address: Department of Biochemistry, University of Washington, Seattle, WA, 98195, USA.
Seungyeon ChoiImmunoBiome Inc, Pohang, 166-20, Republic of Korea.
Jaegyun NohDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Seung Won KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Juhun LeeImmunoBiome Inc, Pohang, 166-20, Republic of Korea.
Seohyun ByunDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Haena LeeDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
John Chulhoon ParkDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Hye Eun ParkDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Amit SharmaDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.
Minhyuk ParkImmunoBiome Inc, Pohang, 166-20, Republic of Korea.
Junghwan ParkImmunoBiome Inc, Pohang, 166-20, Republic of Korea.
Choong-Gu LeeCenter for Natural Product Systems Biology, Korea Institute of Science and Technology (KIST), Gangneung, 25451, Republic of Korea.
Kwang Hyun ChaCenter for Natural Product Systems Biology, Korea Institute of Science and Technology (KIST), Gangneung, 25451, Republic of Korea.
Sin-Hyeog ImDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea. iimsh@postech.ac.kr.

Funding

Korea Institute of Science and Technology 2Z07251Ministry of Education, Science and Technology RS-2024-00414820Ministry of Science and ICT, South Korea RS-2024-00345575
6 · The paper itself

Abstract

backgroundThe gut microbiota plays an essential role in mucosal immunity, with secretory immunoglobulin A (IgA) acting as a key effector in neutralizing pathogens and maintaining host-microbiota homeostasis. IgA production occurs via T cell-dependent (TD) and -independent pathways, with T follicular helper (Tfh) cells driving high-affinity, antigen-specific IgA responses. However, the specific microbial taxa and metabolites that regulate Tfh-mediated IgA responses under steady-state conditions remain poorly understood. This study investigated how gut microbiota-derived signals shape Tfh responses and IgA production, with implications for enhancing mucosal vaccine efficacy.

resultsWe demonstrate that Peyer's patches (PP)-derived Tfh cells exhibit superior IgA-inducing capacity compared to splenic Tfh cells. RNA sequencing revealed distinct transcriptional profiles in PP-Tfh cells, including upregulation of the genes associated with Tfh differentiation and activation (Bcl6, Cd40lg, Maf), T-B cell interactions (Il21, Sh2d1a, Fyn), and migration (Ccr6, Cxcr5). Functionally, PP-Tfh cells formed larger T-B cell contact areas and induced significantly higher IgA secretion in co-culture than their splenic counterparts. Microbiota depletion experiments revealed that eliminating neomycin-depleted bacteria reduced fecal IgA levels and diminished PP-Tfh cell frequencies. Fecal microbiota transplantation from neomycin-treated mice restored both IgA production and Tfh responses in germ-free (GF) mice. Bioinformatic analysis (PICRUSt2 and LEfSe) identified butyrate-producing Lachnospiraceae and Ruminococcaceae as key drivers of the Tfh-IgA axis. Butyrate supplementation enhanced Tfh differentiation and IgA⁺ germinal center B cell development in vitro and increased fecal IgA levels in vivo. Mechanistically, butyrate promoted IgA production via GPR43 signaling, as its effect was lost in co-cultures with Gpr43

conclusionsOur study underscores the crucial role of the gut microbiota, particularly neomycin-depleted butyrate producing taxa, in regulating PP-Tfh cell function and IgA production. Butyrate emerges as a metabolite linking microbial metabolism to Tfh differentiation and IgA class switching. Together, these findings establish a microbiota-metabolite-Tfh cell axis essential for mucosal immune homeostasis and suggest novel strategies for enhancing vaccine efficacy and protection against enteric infections. Video Abstract.

Indexed as

ButyratesGastrointestinal MicrobiomeImmunity, MucosalT Follicular Helper CellsT-Lymphocytes, Helper-InducerVaccinesAnimalsB-LymphocytesCell DifferentiationFemaleImmunoglobulin AImmunoglobulin A, SecretoryMiceMice, Inbred C57BLPeyer's PatchesSpleenButyratesImmunoglobulin AImmunoglobulin A, SecretoryVaccinesButyrateGut microbiotaImmunoglobulin AMucosal immunityPeyer’s patchesSalmonella TyphimuriumT follicular helper cell

Identifiers

PMID41566359
PMCPMC12825270

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.