Evidence map›Paper›PMID 41563843›Full record

ArticleCancer immunology research2026

Ex Vivo Immuno-Oncology Platform Reveals Spatial T-cell Infiltration Patterns Linked to ATR Inhibition Responses in High-Grade Serous Ovarian Cancer.

Ashwini Sakrepatna Nagaraj, Matilda Salko, Aditi Sirsikar, Ziqi Kang, Erdogan Pekcan Erkan, Elina A Pietilä, Iga Niemiec, Jie Bao, Giovanni Marchi, Angéla Szabó and 18 more

Abstract read
In one paragraph

Article in Cancer immunology research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Ashwini Sakrepatna NagarajResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-9048-2116
Matilda Salko *Research Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-2548-8017
Aditi Sirsikar *Research Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-7901-5023
Ziqi KangResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0009-0003-2084-610X
Erdogan Pekcan ErkanResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-9287-4773
Elina A PietiläResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-0209-9369
Iga NiemiecResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-6134-5083
Jie BaoResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-1993-7309
Giovanni MarchiResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-9513-1123
Angéla SzabóResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0009-0008-0743-7893
María Hincapié-OteroResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-8750-1729
Anastasia LundgrenResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0009-0008-4724-528X
Kirsten NowlanDepartment of Bacteriology and Immunology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-8713-4823
Sanna PikkusaariResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-2966-0446
Anna KanervaDepartment of Obstetrics and Gynecology, Helsinki University Hospital, Helsinki, Finland.ORCID 0000-0003-3355-7393
Johanna TapperDepartment of Obstetrics and Gynecology, Helsinki University Hospital, Helsinki, Finland.ORCID 0000-0002-1352-639X
Riitta Koivisto-KoranderDepartment of Obstetrics and Gynecology, Helsinki University Hospital, Helsinki, Finland.ORCID 0000-0003-4457-9002
Heini LassusResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-0598-5147
Liisa KauppiResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-6759-8997
Sampsa HautaniemiResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-7749-2694
Anna VähärautioResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-4721-3954
Jing TangResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-7480-7710
Eliisa KekäläinenDepartment of Bacteriology and Immunology, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-6045-108X
Ulla-Maija HaltiaResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-1629-6400
Anni VirtanenResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-7467-8434
Joonas JukonenResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-9267-543X
Tuula SaloDepartment of Oral and Maxillofacial Diseases, University of Helsinki, Helsinki, Finland.ORCID 0000-0001-6039-0088
Anniina FärkkiläResearch Program in Systems Oncology, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-3558-6617

Funding

European Research Council 101076096HORIZON EUROPE European Research Council (ERC) 101076096Sigrid Juséliuksen Säätiö (Sigrid Jusélius Stiftelse)
6 · The paper itself

Abstract

Identifying new therapeutic approaches in high-grade serous ovarian cancer (HGSC) requires the development of more accurate preclinical models that replicate the patient-specific tumor and its microenvironment. To address this, we established immunocompetent patient-derived cultures (iPDC) for HGSC, cultured on a physiologically relevant human omentum gel matrix. We developed a high-throughput platform that combines drug testing, histologic analysis, genomic profiling, single-cell studies, and spatial biomarker discovery. Our results from 47 tumors showed that iPDCs recapitulated the tumor genomic and histologic characteristics while also retaining the intratumoral immune cells. The iPDC treatment responses correlated significantly with the patients' clinical treatment responses. Using iPDCs and single-cell RNA sequencing, we identified potentially effective therapeutic options for patients with recurrent HGSC linked to distinct tumor cell states and mechanisms of resistance. High-throughput drug response profiling with single-cell imaging identified ataxia telangiectasia and Rad3-related inhibitor (ATRi) combined with an immunotherapy targeting autotaxin as a promising new combination treatment for HGSC. Using hyperplexed imaging and spatial analysis, we discovered that ATRi responses were associated with significant increases in both intra- and peritumoral T-cell infiltration, particularly in PD-1+ CD8+ T cells. Additionally, the ATRi-induced reactivation of CD8+ T cells was linked to spatial interactions with replication stress-positive tumor cells. Thus, our iPDC platform presents a representative high-throughput ex vivo model to advance precision oncology in HGSC, uncovering the ATRi-immunotherapy combination as a potentially effective therapeutic option for clinical translation.

Indexed as

Ataxia Telangiectasia Mutated ProteinsCystadenocarcinoma, SerousLymphocytes, Tumor-InfiltratingOvarian NeoplasmsT-LymphocytesFemaleHumansNeoplasm GradingTumor MicroenvironmentAtaxia Telangiectasia Mutated ProteinsATR protein, human

Identifiers

PMID41563843
PMCPMC7618831

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.