Evidence map›Paper›PMID 41563788›Full record

ArticleMolecular cancer research : MCR2026

Contrasting Features of Papillary and Chromophobe Renal Cell Carcinoma Revealed by Whole-Genome Sequencing.

Richard Culliford, Charlie Mills, Daniel Chubb, Ben Kinnersley, Amit Sud, Alex J Cornish, Lisa Browning, Samuel E D Lawrence, Robert Bentham, Anna Frangou and 6 more

Abstract read
In one paragraph

Article in Molecular cancer research : MCR, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Richard CullifordDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0003-4534-9241
Charlie MillsDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0002-4755-7549
Daniel ChubbDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0002-3813-0981
Ben KinnersleyDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0003-1783-6296
Amit SudDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0002-6133-0164
Alex J CornishDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0002-3966-3501
Lisa BrowningDepartment of Cellular Pathology, Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom.ORCID 0000-0003-4254-333X
Samuel E D LawrenceDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0009-0008-9656-2599
Robert BenthamDepartment of Oncology, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0003-0487-8980
Anna FrangouAlgebraic Systems Biology, Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0001-6990-2756
Andreas J GruberDepartment of Biology, University of Konstanz, Konstanz, Germany.ORCID 0000-0001-7664-4257
Kevin LitchfieldThe Tumour Immunogenomics and Immunosurveillance Lab, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0002-3725-0914
David C WedgeManchester Cancer Research Centre, University of Manchester, Manchester, UK.ORCID 0000-0002-7572-3196
James LarkinRenal and Skin Units, The Royal Marsden NHS Foundation Trust, London, United Kingdom.ORCID 0000-0001-5569-9523
Samra TurajlicRenal and Skin Units, The Royal Marsden NHS Foundation Trust, London, United Kingdom.ORCID 0000-0001-8846-136X
Richard S HoulstonDivision of Genetics and Epidemiology, The Institute of Cancer Research, London, United Kingdom.ORCID 0000-0002-5268-0242

Funding

Deciphering Clonal Evolution in Hereditary Renal Cell CarcinomasU01CA247439 · NCI · FRANCIS CRICK INSTITUTE, LTD · PI TURAJLIC, SAMRA · 2020 to 2024
$1.1M
Cancer Research UK (CRUK) C1298/A8362Cancer Research UK (CRUK) FC10988Medical Research Council (MRC)Medical Research Council (MRC) FC10988Melanoma Research Alliance (MRA) 686061NCI NIH HHS U01 CA247439NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research (BRC) A109NIHR Oxford Biomedical Research Centre (OxBRC) Molecular Diagnostics ThemeRosetrees Trust (Rosetrees) A2204Royal Marsden Cancer Charity (The Royal Marsden Cancer Charity)US Department of Defense award W81XWH-22-1-0652Ventana Medical Systems Inc 10467/10530VHL Alliance (VHLA)Wellcome TrustWellcome Trust 214388Wellcome Trust (WT) FC10988
6 · The paper itself

Abstract

The identification of cancer drivers is a cornerstone to the delivery of precision oncology. So far, sequencing of renal cell cancer (RCC) has largely been confined to the clear cell subtype of RCC. In contrast, sequencing analyses of the less common forms of RCC, papillary RCC (pRCC) and chromophobe RCC (ChRCC), have so far been limited. We analyzed whole-genome sequencing data on 164 tumor-normal pairs from the Genomics England 100,000 Genomes Project, providing a comprehensive, high-resolution map of copy number alterations, structural variation, and key global genomic features, including mutational signatures, intratumor heterogeneity, and analysis of extrachromosomal DNA formation. Our research establishes correlations between genomic alterations and histologic diversification and the extent to which genetically-mediated immune escape contributes to the development of these RCC subtypes. IMPLICATIONS: We demonstrate the distinctive genetics that characterizes pRCC and ChRCC and how this information has the potential to inform patient treatment and clinical trials.

Indexed as

Carcinoma, PapillaryCarcinoma, Renal CellKidney NeoplasmsWhole Genome SequencingDNA Copy Number VariationsHumansMutation

Identifiers

PMID41563788
PMCPMC13136883

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.