Evidence map›Paper›PMID 41562278›Full record

ArticleProtein science : a publication of the Protein Society2026

Differences in Src phosphorylation of PSD-93 and PSD-95 drive differences in scaffolding activity.

Frank A Mindlin, Moeka Sasazawa, James Byrnes, Mark E Bowen

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Frank A MindlinDepartment of Physiology and Biophysics, Stony Brook University, Stony Brook, New York, USA.
Moeka SasazawaDepartment of Physiology and Biophysics, Stony Brook University, Stony Brook, New York, USA.
James ByrnesNational Synchrotron Light Source II, Brookhaven National Laboratory, Upton, New York, USA.
Mark E BowenDepartment of Physiology and Biophysics, Stony Brook University, Stony Brook, New York, USA.ORCID https://orcid.org/0000-0002-9525-6986

Funding

SINGLE MOLECULE ANALYSIS OF PSD-95 STRUCTURE AND LIGAND BINDINGR01MH081923 · NIMH · STATE UNIVERSITY NEW YORK STONY BROOK · PI BOWEN, MARK E · 2008 to 2022
$5.6M
Resolving the intoxication mechanism of botulinum neurotoxins using single molecule structural biologyR01GM151334 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI Mark E Bowen · 2023 to 2026
$1.4M
NIGMS NIH HHS GM151334NIGMS NIH HHS R01 GM151334NIMH NIH HHS MH081923NIMH NIH HHS R01 MH081923
6 · The paper itself

Abstract

Scaffold proteins contain multiple binding modules that allow for co-localization of proteins that lack a direct interaction. Evolution resulted in different combinations of binding modules that rewired existing signal transduction pathways. The synaptic Membrane-Associated Guanylate Kinase (MAGuK) scaffold proteins post-synaptic density protein 93 (PSD-93) and post-synaptic density protein 95 (PSD-95) share the same organization of highly conserved binding domains connected by divergent linkers, which generates opposing functions in synaptic plasticity. Both are targets for tyrosine phosphorylation by Src kinase, but the extent and impacts of phosphorylation are poorly understood. Here, we characterized the in vitro phosphorylation of PSD-93 and PSD-95. Both were targeted at multiple sites that were similarly distributed, but PSD-93 was a more robust substrate. While Src kinase has been linked to synaptic plasticity, the direct effects on MAGuK function are not known. We found that phosphorylation differentially affected the affinity of PSD-93 and PSD-95 for postsynaptic client proteins. Phosphorylation also elicited opposite responses in recruitment of key synaptic clients by MAGuKs into supercomplexes, which we equate with scaffolding activity. Surprisingly, phosphorylation affected biomolecular condensation in PSD-93 but not PSD-95, which suggests that the affinity of protein interactions is disconnected from phase separation. Phosphorylation had minimal impacts on the supertertiary structure as assessed by small angle x-ray scattering although single molecule fluorescence resonance energy transfer revealed altered dynamics leaving the origin of functional effects unclear. PSD-95 appears optimized to work with small protein numbers while PSD-93 modulates condensation at higher protein concentrations. This difference suggests action at different stages of synapse maturation, which could be linked to synaptic plasticity.

Indexed as

Disks Large Homolog 4 ProteinMembrane Proteinssrc-Family KinasesAnimalsHumansPhosphorylationProtein BindingRatsDisks Large Homolog 4 ProteinDlg4 protein, ratMembrane Proteinssrc-Family Kinasesbiomolecular condensationmultiprotein interactionsscaffold proteinssingle‐molecule fluorescencesmall angle x‐ray scatteringtyrosine phosphorylation

Identifiers

PMID41562278
PMCPMC12820800

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.