Evidence map›Paper›PMID 41560349›Full record

ArticleBiophysical journal2026

Kinetic modeling of mant-ATP turnover to interpret the biochemically defined myosin SRX state.

Filip Ježek, Seungyeon Julia Han, Alison S Vander Roest, Daniel A Beard

Abstract read
In one paragraph

Article in Biophysical journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

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No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Filip JežekDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan; Department of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czechia. Electronic address: fjezek@umich.edu.
Seungyeon Julia HanDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan.
Alison S Vander RoestDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan.
Daniel A BeardDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan. Electronic address: beardda@umich.edu.

Funding

From proteins to cells to tissues: A multi-scale assessment of biomechanical regulation by the myosin molecular motorRM1GM131981 · NIGMS · STANFORD UNIVERSITY · PI BERNSTEIN, DANIEL, MACK, DAVID LEE · 2019 to 2023
$10.3M
Multiscale Mechanobiology of Right Ventricular FailureR01HL154624 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Anthony J. BAKER, DANIEL A BEARD · 2020 to 2026
$4.9M
Multi-Scale Systems Analysis of Metabolic and Mechanical Determinants of Reserve Cardiac Power OutputR01HL173346 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DANIEL A BEARD · 2024 to 2026
$1.8M
Modeling myosin mechanobiology towards understanding the mechanisms of hypertrophic cardiomyopathyR00HL153679 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VANDER ROEST, ALISON SCHROER · 2023 to 2025
$851k
NHLBI NIH HHS R00 HL153679NHLBI NIH HHS R01 HL154624NHLBI NIH HHS R01 HL173346NIGMS NIH HHS RM1 GM131981
6 · The paper itself

Abstract

The fluorescent ATP analog mant-ATP has become a valuable tool for quantifying occupancy of the myosin super-relaxed (SRX) state, a biochemically inactive state of myosin in striated muscle. Interpretation of mant-ATP fluorescence decay kinetics is confounded by inconsistencies in state definitions and kinetic assumptions. Here, we develop a mass-action kinetic model of myosin cross-bridge cycling and mant-ATP turnover to reconcile these discrepancies and provide a mechanistic framework for interpreting SRX measurements. Our model simulates ATP label-chase experiments and demonstrates that conventional double-exponential fitting methods do not directly quantify SRX occupancy. Instead, we show that slow and fast decay phases of mant-ATP fluorescence arise from label redistribution among kinetically distinct states, not state populations in equilibrium. The model resolves several apparent paradoxes identified in recent studies by reproducing experimental observations without requiring SRX and DRX kinetic isolation or implausible equilibrium constants. Simulations further quantify the impact of experimental factors-such as ADP accumulation, photobleaching, and initial rigor state occupancy-on fluorescence kinetics and SRX estimates. These results support a revised framework for SRX quantification and suggest that label-chase experiments must be interpreted using mechanistic models to accurately assess myosin state distributions and transition kinetics.

Indexed as

Adenosine TriphosphateModels, BiologicalMyosinsAdenosine DiphosphateAnimalsKineticsAdenosine DiphosphateAdenosine TriphosphateMyosins

Identifiers

PMID41560349
PMCPMC12970303

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.