Evidence map›Paper›PMID 41556969›Full record

ArticleAIDS (London, England)2026

Mutational profiling of HIV+ diffuse large B-cell lymphoma reveals distinct mutational features with evidence of genomic instability.

Sophia M Roush, Samantha Beck, Jenny Coelho, Amon Chirwa, Marriam Mponda, Edwards Kasonkanji, Maurice Mulenga, Tamiwe Tomoka, Steven Vensko, Akil Merchant and 8 more

Abstract read
In one paragraph

Article in AIDS (London, England), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Sophia M RoushDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Samantha BeckDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Jenny CoelhoDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Amon ChirwaUNC Project Malawi, Lilongwe.
Marriam MpondaUNC Project Malawi, Lilongwe.
Edwards KasonkanjiUNC Project Malawi, Lilongwe.
Maurice MulengaUNC Project Malawi, Lilongwe.
Tamiwe TomokaUNC Project Malawi, Lilongwe.
Steven VenskoUNC Lineberger Comprehensive Cancer Center, Chapel Hill, NC.
Akil MerchantDivision of Hematology and Oncology, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA.
Alexander M XuFischell Department of Bioengineering, University of Maryland, College Park, MD.
Jeremy R WangDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Jonathan GaleottiDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Satish GopalNational Cancer Institute Center for Global Health, Rockville, MD, USA.
Melinda YatesDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Russell BroaddusDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.
Matthew S PainschabUNC Project Malawi, Lilongwe.
Yuri FedoriwDepartment of Pathology and Laboratory Medicine, School of Medicine, University of North Carolina (UNC), Chapel Hill, NC, USA.

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
The road to recovery: An assessment of patient-reported quality of life among cancer survivors in Malawi.U54CA254564 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAMANIA, BLOSSOM A · 2020 to 2024
$6.1M
UNC Integrated Translational Oncology Program (UNC-iTOP)T32CA244125 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WILLIAM Y. KIM, Jen Jen Yeh · 2019 to 2026
$3.9M
Characterization of Diverse Pediatric Cancers in LMIC Using Low-Cost Nanopore SequencingR01CA293366 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Thomas Blick Alexander, Jeremy R Wang · 2024 to 2026
$3.0M
NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA293366NCI NIH HHS T32 CA244125NCI NIH HHS U54 CA254564
6 · The paper itself

Abstract

backgroundPeople with HIV (PWH) remain underrepresented in molecular studies and clinical trials of diffuse large B-cell lymphoma (DLBCL), despite DLBCL being a leading cause of cancer-related death in this population.

methodsWe performed whole-exome sequencing on 30 DLBCL tumors (24 with paired germline) from a Malawian cohort including both HIV-positive (HIV+) and HIV-negative (HIV-) individuals.

resultsKMT2D , BIRC6 , TP53 , and ARID1A were among the most frequently mutated genes. Compared to HIV- DLBCL, the HIV+ DLBCL tumors in this cohort were enriched for mutations in KMT2D , among others, and prior antiretroviral therapy associated with increased tumor mutational burden (TMB) and neoantigen load. Five HIV+ DLBCL tumors exhibited microsatellite instability (MSI), each with strong contributions from mutational signatures related to DNA repair. Furthermore, ARID1A mutations were observed in several MSI samples and in tumors with MSH2 loss. Integration with a published HIV+ DLBCL dataset revealed recurrent driver mutations including LILRB1 p.R30S, MYD88 p.S206C and p.S238N, and NRAS p.Q61K, as well as PTEN mutation as negatively prognostic.

conclusionsTogether, these results highlight distinct tumorigenic mechanisms in HIV+ DLBCL and underscore the need for mutational profiling of HIV+ DLBCL cohorts worldwide to identify biomarkers and therapeutic targets.

Indexed as

Genomic InstabilityHIV InfectionsLymphoma, Large B-Cell, DiffuseMutationAdultDNA Mutational AnalysisExome SequencingFemaleHumansMaleMiddle AgedSouthern African PeopleAfricaantiretroviral therapybiomarkersdiffuse large B-cell lymphomagenomicsHIVmicrosatellite instabilityneoantigen

Identifiers

PMID41556969
PMCPMC12981551

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.