Evidence map›Paper›PMID 41556334›Full record

ArticleRapid communications in mass spectrometry : RCM2026

Pyrene-Conjugated, 2-Pyridinecarboxaldehyde Derivatives as N-Terminus-Specific Tags for MALDI- and LALDI-MS.

Mujia Jenny Li, Murat Kucukdisli, Florian Braun, David W Will, Nadine Meier, Bettina Wehrle, Larissa Chiara Meyer, Melanie Christine Föll, Oliver Schilling

Abstract read
In one paragraph

Article in Rapid communications in mass spectrometry : RCM, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mujia Jenny LiInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.
Murat KucukdisliChemical Synthesis Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.
Florian BraunChemical Synthesis Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.
David W WillChemical Synthesis Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.
Nadine MeierInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.
Bettina WehrleInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.
Larissa Chiara MeyerInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.
Melanie Christine FöllInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.ORCID https://orcid.org/0000-0002-1887-7543
Oliver SchillingInstitute for Surgical Pathology, Faculty of Medicine, University Medical Centre Freiburg, University of Freiburg, Freiburg, Germany.

Funding

Bundesministerium für Bildung und Forschung 01KT2201, PREDICOBundesministerium für Bildung und Forschung 01KT2333, ICC-STRATBundesministerium für Bildung und Forschung 01KU1915ABundesministerium für Bildung und Forschung 01KU1916Bundesministerium für Bildung und Forschung 13GW0603E, ESTHERBundesministerium für Bildung und Forschung FKZ 03ZU1208AA, nanodiag BWDeutsche Forschungsgemeinschaft 322977937Deutsche Forschungsgemeinschaft 405351425Deutsche Forschungsgemeinschaft 423813989Deutsche Forschungsgemeinschaft 431336276Deutsche Forschungsgemeinschaft 43198400Deutsche Forschungsgemeinschaft 441891347Deutsche Forschungsgemeinschaft 444936968Deutsche Forschungsgemeinschaft 446058856Deutsche Forschungsgemeinschaft 466359513German Consortium for Translational Cancer Research BW1_1198/03 "KASPAR"investBW project BW1_1198/03 "KASPAR"
6 · The paper itself

Abstract

backgroundProteolytic processing is a fundamental post-translational modification. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) workflows are powerful for degradomic analyses but inherently sacrifice spatial information, a critical aspect for investigating biological systems such as aberrant extracellular matrix remodeling and alterations of the tumor microenvironment. Matrix-assisted laser desorption/ionization (MALDI) offers potential for fast spatial profiling, but MALDI imaging of tryptic peptides is still challenged by spectral crowding and restricted abilities for MALDI MS/MS identification.

methodsTo address these limitations, we developed pyrene-conjugated 2-pyridinecarboxaldehyde (pyr-2PCA) tags for selective N-terminal labeling and enhanced detection sensitivity. The 2PCA reagent exclusively modifies N-terminal α-amines, not lysine ε-amines, as could be confirmed in MALDI-MS, with concentration-dependent side reactions minimized by dilution. A distinct reporter ion produced by 2PCA-labeled peptides in prm-PASEF (MALDI MS/MS) serves as a unique marker for successful labeling.

resultsThe covalent conjugation of 2PCA with a pyrene structure results in the pyr-2PCA tag that enables matrix-free, label-assisted laser desorption ionization mass spectrometry (LALDI-MS) measurements of peptides. We demonstrate that labeling with a pyrene-coupled 2PCA tag (pyr-2PCA) prior to tryptic digestion results in the selective detection of N-terminal peptides in LALDI, with no significant off-target labeling.

conclusionsThis study presents the first presentation and characterization of this novel pyr-2PCA tag, thereby laying the groundwork and demonstrating its future potential for MALDI/LALDI-based in situ spatial N-terminomics to study proteolytic processes.

Indexed as

PyrenesPyridinesSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnimalsTandem Mass SpectrometrypyrenePyrenesPyridines

Identifiers

PMID41556334
PMCPMC12817326

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.