Evidence map›Paper›PMID 41555213›Full record

ArticleBMC microbiology2026

Effect of metabolites on the survival and biofilm formation of Pantoea piersonii (Basionym: Kalamiella piersonii) in synthetic urine media.

Yuvarajan Subramaniyan, K S Megha, K Adithyan, Rajendu R Nair, M Mujeeburahiman, Blessy M Baby, Pallavi Poojarira Ganesh, Punchappady Devasya Rekha

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuvarajan SubramaniyanDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.ORCID 0000-0003-1172-0938
K S MeghaDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.ORCID 0009-0007-5967-9512
K AdithyanDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.
Rajendu R NairDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.
M MujeeburahimanDepartment of Urology, Yenepoya Medical College and Hospital, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore, 575018, India.ORCID 0009-0001-6653-5791
Blessy M BabyDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.ORCID 0009-0009-8032-9052
Pallavi Poojarira GaneshDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India.
Punchappady Devasya RekhaDivision of Microbiology and Biotechnology, Yenepoya (Deemed to be University), Yenepoya Research Centre, University Road, Deralakatte, Mangalore, 575018, India. rekhapd@yenepoya.edu.in.ORCID 0000-0002-9187-6395

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pantoea piersonii (Basionym: Kalamiella piersonii) is an opportunistic pathogen capable of forming strong biofilms and infecting diverse anatomical sites. In this study, we investigated the growth, biofilm forming ability and ureolytic activity of P. piersonii under different growth conditions using synthetic urine to test its adaptability under different urinary conditions. We used P. piersonii strain YU22, isolated from the urine of a patient with kidney stone disease, and cultured under different urea concentrations (10 mM − 420 mM) to evaluate urea tolerance. Glucose, creatinine, and albumin were supplemented in synthetic urine to simulate the glycosuria, creatinuria, and albuminuria. Additionally, the effect of urinary pH variation was examined by adjusting the media to pH 5, pH 7, and pH 8. To investigate the ability of P. piersonii to co-exist with other key uropathogenic bacteria, we used a uropathogenic Escherichia coli, in a co-culture experiment. Under all the tested conditions, the growth, biofilm formation, and ureolytic activity were quantified using standard methods. Expression of urea carboxylase and allophanate hydrolase, in the selected conditions was analyzed using qRT-PCR. P. piersonii was able to tolerate urea at all the tested concentrations, showing a significant increase in growth (OD600) with increasing concentrations of urea from 0.19 ± 0.01 (10 mM) to 0.59 ± 0.01 (420 mM) (p < 0.01). Biofilm formation measured by crystal violet staining method also showed significant increase with OD590 values from 10 mM (0.55 ± 0.03) to 420 mM urea (1.74 ± 0.05) (p < 0.01). Among the nutritional supplements the highest growth and biofilm formation was observed in glucose, followed by creatinine and albumin. The combination of glucose with creatinine resulted in 25% and 30% increase in growth, respectively, compared to media containing glucose or creatinine separately. pH 7 favored growth and biofilm formation in all the tested conditions, except in the presence of glucose. Growth response and ureolytic activity varied significantly with changes in the nutritional composition and pH of the media (p < 0.05). In dual-species biofilm environment, P. piersonii dominated over E. coli under the tested growth conditions, suggesting a competitive advantage in the urinary environment that may influence community structure in mixed-species biofilms. These results demonstrate that the survival mechanism and ureolytic activity of P. piersonii are complex with the ability to adapt to varying environmental conditions in response to nutrient availability to enable survival under extreme conditions. However, these preliminary findings require validation through further investigations.

Indexed as

BiofilmsCulture MediaPantoeaUrineBacterial ProteinsHumansHydrogen-Ion ConcentrationMicrobial ViabilityUreaBacterial ProteinsCulture MediaUreaKalamiella piersoniiPantoea piersoniiPolymicrobial biofilmUrinary tract infectionUrological diseasesVirulence

Identifiers

PMID41555213
PMCPMC12951989

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.