Evidence map›Paper›PMID 41555018›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2026

QTL mapping of oat crown rust resistance in Australian fields and identification of a seedling resistance locus in oat line GS7.

Duong T Nguyen, David Lewis, Eva C Henningsen, Zhouyang Su, Rohit Mago, Jana Sperschneider, Peter N Dodds, Allan Rattey, Belayneh A Yimer, Kathy Esvelt Klos and 1 more

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Duong T NguyenCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
David LewisCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Eva C HenningsenCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Zhouyang SuCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Rohit MagoCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Jana SperschneiderCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Peter N DoddsCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia.
Allan RatteyIntergrain, 19 Ambitious Link, Bibra Lake, Perth, WA, 6163, Australia.
Belayneh A YimerSmall Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 South 2700 West, Aberdeen, ID, 83210, USA.
Kathy Esvelt KlosSmall Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 South 2700 West, Aberdeen, ID, 83210, USA.
Melania FigueroaCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2600, Australia. melania.figueroa@csiro.au.ORCID http://orcid.org/0000-0003-2636-661X

Funding

GRDC CSP2204-007RTX
6 · The paper itself

Abstract

The development of oat cultivars with resistance to crown rust caused by Puccinia coronata f. sp. Avenae (Pca) is key for sustainable disease control. This study examined two recombinant inbred line populations, Provena x GS7 and Boyer x GS7, to identify adult plant resistance QTL in Australian fields. Seven distinct QTL associated with rust resistance were identified. KASP markers were developed for single nucleotide polymorphisms (SNPs) tightly linked to the four most significant QTL on chromosomes 4A and 7A. A major QTL named QPc_GS7_4A.2 with a resistance allele derived from line GS7 was mapped to chromosome 4A, overlapping with genomic regions previously associated with both resistance gene Pc61 and adult plant resistance. Genetic mapping for rust resistance at the seedling stage using a subset of Provena x GS7 lines with contrasting alleles at QPc_GS7_4A.2 suggests a role of this locus in seedling resistance, which may be explained by the presence of Pc61. Seedling resistance profiles between GS7 and the Pc61 differential line against 20 Pca isolates, a haplotype analysis of QPc_GS7_4A.2 in the oat crown rust differential set, and a collection of 182 oat lines support this hypothesis, although confirmation needs future research. The KASP markers developed in this study will assist breeders in efficiently integrating the resistance allele for gene combinations in new cultivars.

Indexed as

AvenaChromosome MappingDisease ResistancePlant DiseasesPucciniaQuantitative Trait LociSeedlingsAllelesAustraliaBasidiomycotaChromosomes, PlantGenetic LinkageGenetic MarkersHaplotypesPhenotypePolymorphism, Single NucleotideGenetic Markers

Identifiers

PMID41555018
PMCPMC12815998

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.