Evidence map›Paper›PMID 41554880›Full record

ArticleCommunications biology2026

Temporal dynamics of collateral RNA cleavage by LbuCas13a in human cells.

Jorik Frederik Bot, Zhihan Zhao, Mengyuan Li, Darnell Kammeron, Peng Shang, Niels Geijsen

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jorik Frederik Bot *Dept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-0991-1201
Zhihan Zhao *Dept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands.
Mengyuan LiDept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands.
Darnell KammeronDept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands.
Peng ShangDept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands. p.shang@lumc.nl.ORCID http://orcid.org/0000-0002-8707-4146
Niels GeijsenDept. of Anatomy & Embryology, Leiden University Medical Center, Leiden, The Netherlands. n.geijsen@lumc.nl.ORCID http://orcid.org/0000-0003-3592-4353

Funding

China Scholarship Council (CSC) 201706890022China Scholarship Council (CSC) 202206300033Netherlands Organisation for Scientific Research | Stichting voor de Technische Wetenschappen (Technology Foundation STW) 15804Novo Nordisk Fonden (Novo Nordisk Foundation) NNF21CC0073729Prinses Beatrix Spierfonds W.OR18-11
6 · The paper itself

Abstract

CRISPR-Cas13 exclusively targets RNA. In prokaryotes, Cas13 cleaves both target and non-target RNA indiscriminately upon activation by a specific target RNA, but in eukaryotic cells collateral cleavage activity has been limited. Here we report that LbuCas13a exhibits strong collateral RNA cleavage activity in human cells when delivered as ribonucleoprotein, independent of cell line and targeting both exogenous and endogenous transcripts. Collateral RNA cleavage starts within 50 minutes of ribonucleoprotein delivery resulting in major alterations to the total RNA profile. In response to the collateral RNA cleavage, cells upregulate genes associated with the stress and innate immune response, ultimately leading to apoptotic cell death. This enables us to use LbuCas13a as a flexible and repeatable target-RNA-specific cell elimination tool. Finally, using both total RNA sequencing and Nanopore sequencing, we find that LbuCas13a activation leads to rapid and near-global depletion of cytoplasmic RNAs, and that cleavage occurs at specific nucleotide positions.

Indexed as

CRISPR-Cas SystemsRNARNA CleavageHumansRNA

Identifiers

PMID41554880
PMCPMC12901986

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.