Evidence map›Paper›PMID 41553462›Full record

ArticleJournal of molecular evolution2026

Decoding the Evolution and Co-Phospho-Regulatory Networks of SHROOM Proteins.

Noreen A Khan, Athira C Rajeev, Althaf Mahin, Athira Perunelly Gopalakrishnan, Prathik Basthikoppa Shivamurthy, Nazah Naurah V, Alimath Sambreena, Rajesh Raju

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Article in Journal of molecular evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Noreen A KhanCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Athira C RajeevCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.ORCID http://orcid.org/0000-0002-2934-7118
Althaf MahinCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Athira Perunelly GopalakrishnanCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Prathik Basthikoppa ShivamurthyCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Nazah Naurah VCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Alimath SambreenaCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India.
Rajesh RajuCentre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, Karnataka, 575018, India. rajrrnbt@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The SHROOM protein family (SHROOM1-4) serves as master regulators of actomyosin contractility, apical-basal polarity, and tissue morphogenesis through conserved domains and extensive intrinsically disordered regions (IDRs) that harbour dynamic phosphorylation sites. This study explores their conserved evolutionary patterns, IDRs and integrates ~ 3,800 high-quality human phosphoproteomic datasets to decode co-phospho-regulatory networks of SHROOM1-4, identifying phosphosites per isoform, with few of the SHROOM1 and 3 predominant sites in domain and others clustered near ASD1/ASD2 boundaries. Co-occurrence heatmaps reveal tightly coupled multisite phosphorylation in SHROOM1/3 versus modular, inhibitory patterns in SHROOM2, while SHROOM4 exhibits minimal modification. Upstream kinases, 19 for SHROOM1, 9 for SHROOM2, 7 for SHROOM3 span MAPK, PI3K/AKT, and Rho pathways, with co-phosphorylated kinases, phosphatases, and binary interactors forming dense hubs integrating cytoskeletal, cell cycle, and transcriptional signaling. Dysregulation links SHROOM3 hypophosphorylation to neural tube defects and chronic kidney disease, SHROOM2 to cancer migration/EMT, and SHROOM4 mutations to intellectual disability. By mapping phospho-logic to functional outcomes, this work establishes a unified framework for SHROOM-dependent morphogenetic control, highlighting therapeutic opportunities in developmental disorders and fibrosis through targeted kinase/phosphatase modulation.

Indexed as

Microfilament ProteinsAnimalsEvolution, MolecularHumansPhosphoproteinsPhosphorylationSignal TransductionMicrofilament ProteinsPhosphoproteinsCo-phospho regulatory networkCytoskeletonKinaseSHROOM

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