Evidence map›Paper›PMID 41546107›Full record

ArticleJournal of orthopaedic surgery and research2026

Synovial transcriptome analysis reveals ShenTong ZhuYu Tang alleviates osteoarthritis by targeting MMP-9 and immune microenvironment.

Tihong Liang, Bo Zhou, Changwen Gu, Guoxuan Peng, Xu Ning, Mingzhi Huang

Abstract read
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Article in Journal of orthopaedic surgery and research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Tihong Liang *Department of Orthopaedics, The Affiliated Hospital of Guizhou Medical University, Guizhou, 550004, China.
Bo Zhou *State Key Laboratory of Discovery and Utilization of Functional Components in Traditional Chinese Medicine, Guizhou Medical University, Guizhou, 550004, China.
Changwen GuDepartment of Orthopaedics, The Affiliated Hospital of Guizhou Medical University, Guizhou, 550004, China.
Guoxuan PengDepartment of Orthopaedics, The Affiliated Hospital of Guizhou Medical University, Guizhou, 550004, China. pgxuan@outlook.com.
Xu NingDepartment of Orthopaedics, The Affiliated Hospital of Guizhou Medical University, Guizhou, 550004, China. 179451982@qq.com.
Mingzhi HuangDepartment of Orthopaedics, The Affiliated Hospital of Guizhou Medical University, Guizhou, 550004, China. gyhmz8013@yeah.net.

Funding

Basic Research Program of Guizhou Medical University Affiliated Hospital gyfynsfc-2021-25the Basic Research Program of Science and Technology Department of Guizhou Province ZK [2023]312
6 · The paper itself

Abstract

backgroundThis study aimed to elucidate key molecular alterations in the osteoarthritis (OA) synovial microenvironment through transcriptomic analysis and to investigate the multi-target mechanisms of ShenTong ZhuYu Tang (STZYT) using network pharmacology and molecular docking.

methodsWe systematically integrated microarray data from OA synovial tissue available in the Gene Expression Omnibus (GEO) database. An integrated bioinformatics approach, including differential expression analysis, weighted gene co-expression network analysis (WGCNA), immune infiltration profiling, and machine learning, was employed to identify core genes and pathways. Subsequently, a network pharmacology analysis was conducted to construct an herb-compound-target-disease network and elucidate the potential mechanism of action of STZYT. Molecular docking was performed to validate the interaction between key STZYT compounds and matrix metalloproteinase-9 (MMP-9).

resultsA total of 294 differentially expressed genes (DEGs) were identified. Enrichment analysis revealed that these DEGs were significantly involved in inflammatory response and immune regulatory processes, as well as the pathways of osteoclast differentiation, NF-kappa B signaling, and IL-17 signaling. WGCNA and protein-protein interaction network analysis identified 51 hub genes. Subsequently, four machine learning algorithms further refined these to five key diagnostic biomarker candidates (CD4, MMP9, TNFSF11, CX3CR1, and EIF5B). Immune infiltration analysis showed significant infiltration of CD4 + T cells and M2-polarized macrophages. Network pharmacology identified 79 active STZYT compounds and 22 OA-related targets, suggesting the formula acts by inhibiting inflammation, metalloproteinase activity, and fibrosis. Molecular docking studies confirmed that quercetin, luteolin, and baicalein exhibit strong binding affinity to MMP-9.

conclusionsElevated MMP expression, particularly of MMP-9, in synovial tissue is closely associated with OA progression. STZYT may exert therapeutic effects against OA through multi-target mechanisms, including suppressing inflammation, inhibiting metalloproteinases, and preventing synovial fibrosis.

Indexed as

Cellular MicroenvironmentDrugs, Chinese HerbalGene Expression ProfilingMatrix Metalloproteinase 9OsteoarthritisSynovial MembraneHumansMolecular Docking SimulationNetwork PharmacologyDrugs, Chinese HerbalMatrix Metalloproteinase 9MMP9 protein, humanMMP-9Network pharmacologyOsteoarthritisShenTong ZhuYu tangSynovial

Identifiers

PMID41546107
PMCPMC12892795

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.