Evidence map›Paper›PMID 41545362›Full record

ArticleNature communications2026

Polymerase mutations underlie early adaptation of H5N1 influenza virus to dairy cattle and other mammals.

Vidhi Dholakia, Jessica L Quantrill, Samuel A S Richardson, Nunticha Pankaew, Maryn D Brown, Jiayun Yang, Fernando Capelastegui, Tereza Masonou, Katie-Marie Case, Jila Ajeian and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Vidhi Dholakia *Department of Pathobiology and Population Sciences, Royal Veterinary College, London, UK.ORCID http://orcid.org/0009-0002-2820-1499
Jessica L Quantrill *Department of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-2439-1822
Samuel A S Richardson *The Pirbright Institute, Woking, UK.ORCID http://orcid.org/0000-0001-7149-3832
Nunticha Pankaew *The Roslin Institute, University of Edinburgh, Edinburgh, UK.
Maryn D Brown *Department of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-6257-0672
Jiayun Yang *The Pirbright Institute, Woking, UK.
Fernando CapelasteguiDepartment of Pathobiology and Population Sciences, Royal Veterinary College, London, UK.ORCID http://orcid.org/0000-0002-0283-7563
Tereza MasonouGreat Ormond Street UCL Institute of Child Health, London, UK.ORCID http://orcid.org/0000-0003-3663-8965
Katie-Marie CaseGreat Ormond Street UCL Institute of Child Health, London, UK.ORCID http://orcid.org/0000-0003-2078-9451
Jila AjeianGreat Ormond Street UCL Institute of Child Health, London, UK.
Maximillian N J WoodallGreat Ormond Street UCL Institute of Child Health, London, UK.ORCID http://orcid.org/0000-0003-4511-9171
Callum MagillMRC-University of Glasgow Centre for Virus Research, Glasgow, Scotland, UK.
Graham FreimanisThe Pirbright Institute, Woking, UK.
Amy McCarronThe Pirbright Institute, Woking, UK.
Ecco StallerSir William Dunn School of Pathology, The University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-8443-5559
Carol M SheppardDepartment of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-3285-3804
Ian H BrownThe Pirbright Institute, Woking, UK.ORCID http://orcid.org/0000-0003-3909-1301
Pablo R MurciaMRC-University of Glasgow Centre for Virus Research, Glasgow, Scotland, UK.ORCID http://orcid.org/0000-0002-4352-394X
Claire M SmithGreat Ormond Street UCL Institute of Child Health, London, UK.ORCID http://orcid.org/0000-0002-8913-0009
Munir IqbalThe Pirbright Institute, Woking, UK.ORCID http://orcid.org/0000-0001-5165-5339
Paul DigardThe Roslin Institute, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0000-0002-0872-9440
Wendy S BarclayDepartment of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-3948-0895
Rute M PintoThe Roslin Institute, University of Edinburgh, Edinburgh, UK. rpinto2@exseed.ed.ac.uk.ORCID http://orcid.org/0000-0003-3291-1397
Thomas P PeacockDepartment of Infectious Disease, Imperial College London, London, UK. tom.peacock@pirbright.ac.uk.ORCID http://orcid.org/0000-0001-7077-2928
Daniel H GoldhillDepartment of Pathobiology and Population Sciences, Royal Veterinary College, London, UK. dgoldhill@rvc.ac.uk.ORCID http://orcid.org/0000-0003-4597-5963

Funding

Defra | Animal Health and Veterinary Laboratories Agency (AHVLA) SE2223RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/PI/230002ARCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/PI/230002BRCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/PI/23NB0003RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/PI/23NB0004RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/RL/230002CRCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/V004697/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/V011286/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/X006123/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/Y007298/1Royal Society 231225
6 · The paper itself

Abstract

In 2024, an unprecedented outbreak of H5N1 high pathogenicity avian influenza was detected in dairy cattle in the USA resulting in spillbacks into poultry, wild birds and other mammals including humans. Here, we present molecular and virological evidence that the cattle B3.13 genotype H5N1 viruses rapidly accumulated adaptations in polymerase genes that enabled better replication in bovine cells and tissues, as well as cells of other mammals including humans. We find evidence of several mammalian adaptations in cattle including PB2 M631L, which is found in all cattle sequences, and PA K497R, which is found in the majority. Structurally, PB2 M631L maps to the polymerase-ANP32 interface, an essential host factor for viral genome replication. We show that this mutation adapts the polymerase to better interact with bovine ANP32 proteins, particularly ANP32A, and thereby enhances virus replication in bovine mammary systems and primary human airway cultures. We show that ongoing evolution in the PB2 gene, including E627K and a convergently arising D740N substitution, further increase polymerase activity and virus replication in a range of mammalian cells. Thus, circulation of H5N1 in dairy cattle allows virus adaption improving replicative ability in cattle and poses a continued risk of zoonotic spillover.

Indexed as

Influenza A Virus, H5N1 SubtypeOrthomyxoviridae InfectionsRNA-Dependent RNA PolymeraseViral ProteinsAdaptation, PhysiologicalAnimalsCattleCattle DiseasesHumansMutationVirus ReplicationRNA-Dependent RNA PolymeraseViral Proteins

Identifiers

PMID41545362
PMCPMC12905184

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.