Evidence map›Paper›PMID 41545355›Full record

ArticleNature communications2026

Identification of thermotolerant non-canonical PAMs for robust one-pot CRISPR-Cas12a detection.

Tian Tian, Ting Zhang, Wanting Zhang, Zhiqiang Qiu, Xinyi Guo, Yuxin Chen, Mei Lin, Weiwei Qi, Yuting Shen, Mengen Hao and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. SDS-CRISPR for Single-Nucleotide Variant Detection.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Tian Tian *School of Life Sciences, South China Normal University, Guangzhou, China. ttian@m.scnu.edu.cn.ORCID http://orcid.org/0009-0005-0461-5269
Ting Zhang *School of Life Sciences, South China Normal University, Guangzhou, China.
Wanting Zhang *School of Life Sciences, South China Normal University, Guangzhou, China.
Zhiqiang QiuSchool of Life Sciences, South China Normal University, Guangzhou, China.
Xinyi GuoSchool of Life Sciences, South China Normal University, Guangzhou, China.
Yuxin ChenSchool of Life Sciences, South China Normal University, Guangzhou, China.
Mei LinSchool of Life Sciences, South China Normal University, Guangzhou, China.
Weiwei QiSchool of Life Sciences, South China Normal University, Guangzhou, China.
Yuting ShenSchool of Life Sciences, South China Normal University, Guangzhou, China.
Mengen HaoSchool of Life Sciences, South China Normal University, Guangzhou, China.
Hongrui XiaoSchool of Life Sciences, South China Normal University, Guangzhou, China.
Bo XiangThe First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China.
Feibiao PangHangzhou EzDx Technology Co., Ltd., Hangzhou, Zhejiang, China.
Jinzhao SongHangzhou Institute of Medicine, Chinese Academy of Sciences, Hangzhou, Zhejiang, China. songjinzhao@ucas.ac.cn.ORCID http://orcid.org/0000-0002-2097-8685
Baoqing SunThe First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China. sunbaoqing@vip.163.com.ORCID http://orcid.org/0000-0002-1671-0723
Meng ChengThe First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China. ChengMeng@ghmu.edu.cn.
Xiaoming ZhouSchool of Life Sciences, South China Normal University, Guangzhou, China. zhouxm@scnu.edu.cn.ORCID http://orcid.org/0000-0001-5597-4804

Funding

China Postdoctoral Science Foundation 2023M741238National Natural Science Foundation of China (National Science Foundation of China) 32150019National Natural Science Foundation of China (National Science Foundation of China) 82502830
6 · The paper itself

Abstract

The canonical PAM site TTTV (where V = A, G, or C) is widely used in the design of CRISPR-Cas12a systems for both genome editing and diagnostic applications. Although several non-canonical protospacer-adjacent motifs (PAM) have been identified, they generally exhibit weak Cas12a cleavage activity. In this study, we find that increasing the reaction temperature to 45 °C or higher allows the identification of numerous non-canonical PAMs with trans-cleavage activity comparable to that of canonical PAMs, while displaying only weak cis-cleavage activity. Moreover, we observe that combining these non-canonical PAMs with elevated temperatures significantly enhances the Cas12a system's ability to discriminate highly similar sequences. Based on these findings, we develop a non-canonical PAM-mediated, poikilothermal, one-pot CRISPR-Cas12a detection platform (POP-CRISPR), which demonstrates substantial improvements in sensitivity, specificity, speed, and target adaptability for nucleic acid detection compared to existing methods. These advantages are validated through the reliable detection of clinical samples, including those of Human papillomavirus (HPV), Mycoplasma pneumoniae (MP), and its drug-resistant strains. Additionally, we show that POP-CRISPR enables rapid, on-site pathogen detection within 20 min, using a fast sample processing protocol and a miniaturized detection device.

Indexed as

Bacterial ProteinsCRISPR-Associated ProteinsCRISPR-Cas SystemsEndodeoxyribonucleasesNucleotide MotifsBase SequenceTemperatureBacterial ProteinsCas12a proteinCRISPR-Associated ProteinsEndodeoxyribonucleases

Identifiers

PMID41545355
PMCPMC12917250

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.