Evidence map›Paper›PMID 41545236›Full record

ReviewTrends in molecular medicine2026

Mapping clinical CAR-T cells: insights from scRNA-seq.

Michaela M Meehl, Meghan B Ward, Giedre Krenciute

Abstract readReview
In one paragraph

Review in Trends in molecular medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michaela M MeehlDepartment of Bone Marrow Transplantation and Cellular Therapy (BMTCT), St. Jude Children's Research Hospital, Memphis, TN, USA; College of Graduate Health Sciences, University of Tennessee Health Science Center, Memphis, TN, USA.
Meghan B WardDepartment of Bone Marrow Transplantation and Cellular Therapy (BMTCT), St. Jude Children's Research Hospital, Memphis, TN, USA.
Giedre KrenciuteDepartment of Bone Marrow Transplantation and Cellular Therapy (BMTCT), St. Jude Children's Research Hospital, Memphis, TN, USA. Electronic address: Giedre.Krenciute@stjude.org.

Funding

Targeting tumor and T cell DNA methylomes to improve CAR T cell therapies for diffuse midline gliomaU01CA281823 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Giedre Krenciute, Stephen C Mack · 2023 to 2026
$2.8M
GENETICALLY ENGINEERED T CELLS FOR DIPGR01NS122859 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Giedre Krenciute · 2022 to 2026
$2.5M
Improving genetically engineered T cells for medulloblastomasR01NS121249 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI KRENCIUTE, GIEDRE · 2021 to 2025
$2.2M
NCI NIH HHS U01 CA281823NINDS NIH HHS R01 NS121249NINDS NIH HHS R01 NS122859
6 · The paper itself

Abstract

Single cell RNA sequencing (scRNA-seq) has revolutionized the field of biology and become the most powerful tool for evaluating transcriptional profiles of a biological sample. Given its power, it is widely utilized across multiple disciplines, including chimeric antigen receptor (CAR)-T cell therapy. In this review, we provide a comprehensive summary of published studies that have used scRNA-seq to analyze clinical CAR-T cells, focusing on T cell exhaustion, cytotoxicity, memory, expansion, clonal diversity, and cytokines. We also highlight findings on activation, CD4+/CD8+ ratios, proliferation, regulatory T cells (Tregs) and metabolism, and their relevance to patient response across diseases. Finally, we discuss the limitations and future directions of scRNA-seq in CAR-T cell research, providing key insights for clinicians and researchers.

Indexed as

Immunotherapy, AdoptiveReceptors, Chimeric AntigenRNA-SeqSingle-Cell AnalysisT-LymphocytesAnimalsHumansSequence Analysis, RNASingle-Cell Gene Expression AnalysisT-Cell ExhaustionReceptors, Chimeric AntigenCAR T cellpatient samplescRNA-seqT cell fitness

Identifiers

PMID41545236
PMCPMC12865777

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.