Evidence map›Paper›PMID 41543112›Full record

ArticleThe plant genome2026

Extensive phenotyping and genome-wide analysis of grain number-related traits in a diverse wheat core collection.

Zhuo Su, Shun Sakuma, Miyuki Nitta, Yasir S A Gorafi, Shuhei Nasuda

Abstract read
In one paragraph

Article in The plant genome, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zhuo SuLaboratory of Plant Breeding, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Japan.ORCID https://orcid.org/0009-0006-4639-8052
Shun SakumaFaculty of Agriculture, Tottori University, Tottori, Japan.ORCID https://orcid.org/0000-0003-1622-5346
Miyuki NittaLaboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Japan.
Yasir S A GorafiLaboratory of Plant Breeding, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Japan.ORCID https://orcid.org/0000-0003-4068-7807
Shuhei NasudaLaboratory of Plant Breeding, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Japan.ORCID https://orcid.org/0000-0002-9019-8692

Funding

JSPS KAKENHI Grant-in-Aid for Scientific Research (B) 22H02312JSPS KAKENHI Grant-in-Aid for Young Scientists (B) 16K18635MACS project, MAFF, JapanNBRP-Wheat, MEXT, Japan
6 · The paper itself

Abstract

Bread wheat (Triticum aestivum L.) is one of the most important staple crops globally. Grain number per spikelet (GPS) is an important yield component in wheat. It is influenced by floret number per spikelet (FPS) and floret fertility. Through three consecutive years of observation of FPS, GPS, and floret fertility per spikelet (FFPS) in a globally collected hexaploid wheat core collection and using an improved genotyping dataset, we identified 42 marker-trait associations (MTA) for spikelet-related traits through the single-nucleotide polymorphism and the k-mer-based genome-wide association studies. Those MTA explain 4.45%-24.45% phenotypic variations for the FFPS and GPS traits, indicating a substantial effect on spikelet-related traits. We found significant negative associations between days to heading (DTH) and spikelet-related traits, suggesting that DTH and spikelet-related traits are subject to a certain degree of common genetic control. We identified several potential candidate gene models in the associated regions, including TraesCS2A03G0815500, which encodes a protein with a sterile alpha motif domain, and TraesCS2A03G0780600, which encodes a plastid-targeted lipoxygenase. These genes may facilitate wheat breeding and help elucidate the mechanisms of wheat grain set.

Indexed as

Edible GrainGenome, PlantSeedsTriticumGenome-Wide Association StudyGenotypePhenotypePolymorphism, Single NucleotideQuantitative Trait Loci

Identifiers

PMID41543112
PMCPMC12823030

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.