Evidence map›Paper›PMID 41542855›Full record

ArticlePlant biotechnology journal2026

Rewiring Steroidal Metabolic Pathways for Diosgenin Production in Solanum nigrum.

Jongbu Lim, Keunhwa Kim, Jung Heo, Seung Mo Seo, Sungjun Choung, Hyeonjin Kim, Yuri Choi, Kyungsun Park, Hyejung Yun, Dongha Kim and 7 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Jongbu LimDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Keunhwa KimDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.
Jung HeoDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.
Seung Mo SeoDepartment of Chemistry, KAIST, Daejeon, Republic of Korea.ORCID https://orcid.org/0009-0002-8749-456X
Sungjun ChoungDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.ORCID https://orcid.org/0000-0002-2701-4950
Hyeonjin KimDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Yuri ChoiDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Kyungsun ParkDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Hyejung YunDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Dongha KimDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.
Eun Song LeeDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.
Junwoo LeeDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.
Smita Mirsyad WarsadiharjaDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.
Saet Buyl LeePlant Biomaterials and Biotechnology Division, National Institute of Agricultural Science, Rural Development Administration, Jeonju, Republic of Korea.
Sunkyu HanDepartment of Chemistry, KAIST, Daejeon, Republic of Korea.ORCID https://orcid.org/0000-0002-9264-6794
Soon Ju ParkDivision of Life Science and PMBBRC, Gyeongsang National University, Jinju, Republic of Korea.ORCID https://orcid.org/0000-0002-8525-5891
Sang-Gyu KimDepartment of Biological Sciences, KAIST, Daejeon, Republic of Korea.

Funding

National Research Foundation of Korea RS-2020-NR049590National Research Foundation of Korea RS-2021-NR061859National Research Foundation of Korea RS-2024-00352749National Research Foundation of Korea RS-2024-00400556National Research Foundation of Korea RS-2025-02263262Rural Development Administration RS-2024-00322354Rural Development Administration RS-2024-00322407
6 · The paper itself

Abstract

Diosgenin is a key starting material for the synthesis of steroidal drugs, such as corticosteroids and sex hormones. While the primary commercial source of diosgenin is the tubers of Dioscorea spp., identifying alternative plant hosts capable of diosgenin biosynthesis could enhance its production. In this study, we present Solanum nigrum, a widely distributed species of the Solanum genus, as a novel platform for diosgenin production. S. nigrum naturally accumulates high concentrations of steroidal glycoalkaloids (SGAs) with a closed F-ring (spirostanol type) in green fruits and steroidal saponins (STSs) with an open F-ring (furostanol type) in leaves. Both classes originate from cholesterol and share the early oxidation steps, followed by specific reactions that redirect distinct metabolic fluxes. In SGAs, the CYP450 enzyme SnGAME4 oxidises C26-OH to an aldehyde, enabling subsequent transamination. In STSs, SnGAME25, a 3β-hydroxysteroid dehydrogenase/isomerase, initiates the reduction reactions at the C5 double bond. Disruption of these two genes shifted the metabolic profiles from the native SGAs and STSs toward furostanol-type proto-diosgenin glycosides. However, these open F-ring structures yield low diosgenin levels during acid hydrolysis. To overcome this limitation, we identified endogenous furostanol glycoside 26-O-β-glucosidases and employed spontaneous fermentation to convert the furostanol structure to the spirostanol structure. Altogether, S. nigrum green fruits yielded diosgenin up to 1% of dry weight. In addition, we engineered S. nigrum to increase fruit number in combination with the SnGAME4 mutation. These results establish S. nigrum as a promising and scalable host for diosgenin production.

Indexed as

DiosgeninMetabolic Networks and PathwaysSolanum nigrumSteroidsFruitSaponinsDiosgeninSaponinsSteroidsdiosgeninGAMEsmetabolic engineeringSolanum nigrumsteroidal glycoalkaloidsteroidal saponins

Identifiers

PMID41542855
PMCPMC13110167

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.