Evidence map›Paper›PMID 41542695›Full record

ArticlemedRxiv : the preprint server for health sciences2026

Robust Performance of Culture, qPCR, and Genomic Approaches for Shigella Serotyping in a Pediatric Surveillance Cohort.

Francesca Schiaffino, Craig T Parker, Lucero Romaina Cachique, Paul F Garcia Bardales, Jie Liu, Pablo Peñataro Yori, Kerry K Cooper, Ben Pascoe, Patricia Pavlinac, Eric Houpt and 2 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Francesca SchiaffinoFaculty of Veterinary Medicine, Universidad Peruana Cayetano Heredia, San Martin de Porres, Lima, Peru.ORCID 0000-0002-5796-5116
Craig T ParkerSchool of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, AZ.ORCID 0000-0002-7719-8882
Lucero Romaina CachiqueAsociacion Benefica Prisma, Iquitos, Peru.ORCID 0009-0004-4056-4377
Paul F Garcia BardalesAsociacion Benefica Prisma, Iquitos, Peru.ORCID 0000-0002-2050-8878
Jie LiuSchool of Public Health, Qingdao University, Qingdao, China.
Pablo Peñataro YoriDivision of Infectious Diseases and International Health, School of Medicine, University of Virginia, VA, USA.ORCID 0000-0003-3406-5809
Kerry K CooperSchool of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, AZ.ORCID 0000-0003-4541-1324
Ben PascoeIneos Oxford Institute for Antimicrobial Research, Department of Biology, University of Oxford, Oxford, United Kingdom.ORCID 0000-0001-6376-5121
Patricia PavlinacDepartment of Epidemiology, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-0051-9131
Eric HouptDivision of Infectious Diseases and International Health, School of Medicine, University of Virginia, VA, USA.
Maribel Paredes OlorteguiAsociacion Benefica Prisma, Iquitos, Peru.ORCID 0000-0001-9943-8157
Margaret N KosekDivision of Infectious Diseases and International Health, School of Medicine, University of Virginia, VA, USA.ORCID 0000-0001-6340-4852

Funding

Genomic Epidemiology of Campylobacter to Improve Disease Control in Low and Middle Income CountriesR01AI158576 · NIAID · UNIVERSITY OF VIRGINIA · PI KOSEK, MARGARET N · 2021 to 2025
$3.3M
Enabling Infectious Disease Research Capacity in the Peruvian AmazonD43TW010913 · FIC · UNIVERSITY OF VIRGINIA · PI Margaret N Kosek, MARIBEL PAREDES OLORTEGUI · 2018 to 2026
$2.8M
Genomic Epidemiology of Campylobacter in Poultry to Enable the Effective Control of Human Campylobacteriosis in a Middle Income CountryK43TW012298 · FIC · UNIVERSIDAD PERUANA CAYETANO HEREDIA · PI Francesca Schiaffino · 2022 to 2026
$811k
Genomic features of host adaptation of Campylobacter in low-income settingsR21AI163801 · NIAID · UNIVERSITY OF VIRGINIA · PI KOSEK, MARGARET N, PARKER, CRAIG THOMAS · 2022 to 2023
$378k
FIC NIH HHS D43 TW010913FIC NIH HHS K43 TW012298Gates Foundation INV-016650Gates Foundation INV-028721Gates Foundation INV-041730NIAID NIH HHS R01 AI158576NIAID NIH HHS R21 AI163801
6 · The paper itself

Abstract

Background: Methods: Results: Results from all four serotyping methods were available for 107/114 isolates. Accuracy for vaccine subtypes Conclusion: All four serotyping methods achieved acceptable accuracy for

Indexed as

diarrheaO antigensserotypingShigellaShigella flexnerivaccines

Identifiers

PMID41542695
PMCPMC12803388

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.