Evidence map›Paper›PMID 41542567›Full record

ArticlebioRxiv : the preprint server for biology2026

Avl9 defines a family of GTPase-activating proteins that regulate diverse cell biological functions.

Ryan C Vignogna, J Christopher Fromme

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Ryan C VignognaWeill Institute for Cell and Molecular Biology & Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.ORCID 0000-0001-5943-6464
J Christopher FrommeWeill Institute for Cell and Molecular Biology & Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.ORCID 0000-0002-8837-0473

Funding

GTPase Regulation of the Golgi Complex (Diversity Supplement 2023)R35GM136258 · NIGMS · CORNELL UNIVERSITY · PI J Christopher Fromme · 2020 to 2026
$4.0M
Discovery and characterization of a novel family of GTPase activating proteinsF32GM155980 · NIGMS · CORNELL UNIVERSITY · PI VIGNOGNA, RYAN CHRISTOPHER · 2024 to 2025
$152k
NIGMS NIH HHS F32 GM155980NIGMS NIH HHS R35 GM136258
6 · The paper itself

Abstract

Ras-related GTPases are molecular switches regulating hundreds of signaling and trafficking pathways in cells. Many GTPase regulators remain to be identified despite extensive genetic and biochemical screens. Here we present the results of computational protein-protein interaction screens and functional experiments identifying the DENN domain protein Avl9 as a GTPase-activating protein for Arf1. Avl9 is involved in secretion and cell migration, but its molecular function has not been characterized. We determined that Avl9 possesses robust Arf-GAP activity and is recruited to secretory vesicles by Rab8. We find that Avl9 function is conserved in humans and enhances cell migration. We propose that several other DENN domain proteins are also candidate GAPs, and we demonstrate that one candidate previously characterized as a Rab-GEF, DENND6A, exhibits strong Arf-GAP activity towards ARL8B, explaining its role in lysosome positioning. Collectively, this work uncovers a family of monomeric 'DENN GAP' proteins that regulate diverse cell biological pathways.

Identifiers

PMID41542567
PMCPMC12803157

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.