Evidence map›Paper›PMID 41542168›Full record

ArticleBiochemistry and biophysics reports2025

Freezing tissues pre-homogenisation reduces degradation and yields improved quality RNA in the mouse lung.

Khairunnisa Mohd Kamal, Ahmad Rohi Ghazali, Gayathri Thevi Selvarajah, Nurul Syakima Ab Mutalib, Nadiah Abu, Eng Wee Chua, Siti Fathiah Masre

Abstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Khairunnisa Mohd KamalBiomedical Science Programme, Centre for Toxicology and Health Risk Studies (CORE), Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur, 50300, Malaysia.
Ahmad Rohi GhazaliBiomedical Science Programme, Centre for Toxicology and Health Risk Studies (CORE), Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur, 50300, Malaysia.
Gayathri Thevi SelvarajahDepartment of Veterinary Clinical Studies, Faculty of Veterinary Medicine, Universiti Putra Malaysia (UPM), Serdang, 43400, Malaysia.
Nurul Syakima Ab MutalibUKM Medical Molecular Biology Institute, Universiti Kebangsaan Malaysia (UKM), Cheras, Kuala Lumpur, 56000, Malaysia.
Nadiah AbuUKM Medical Molecular Biology Institute, Universiti Kebangsaan Malaysia (UKM), Cheras, Kuala Lumpur, 56000, Malaysia.
Eng Wee ChuaCentre for Drug and Herbal Development, Faculty of Pharmacy, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur, 50300, Malaysia.
Siti Fathiah MasreBiomedical Science Programme, Centre for Toxicology and Health Risk Studies (CORE), Faculty of Health Sciences, Universiti Kebangsaan Malaysia (UKM), Kuala Lumpur, 50300, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribonucleic acid (RNA) extraction requires meticulous sample handling to ensure purity and integrity. Although a variety of commercial kits are available, along with optimised protocols, pre-extraction sample processing remains a challenging procedure, especially with tissue samples. In our brief report, we describe the beneficial impact of freezing tissues before homogenisation on the quality of RNA extraction. Lung tissues were freshly excised from mice and homogenised with or without prior quick freezing in a freezer. Then, RNA was extracted according to the protocol provided with a commercial column-based RNA extraction kit. RNA quality was analysed by UV absorbance and agarose gel electrophoresis. We found that the frozen tissues yielded better-quality, more intact RNA than the non-frozen tissues, possibly due to lower temperatures during homogenisation. "Smearing", indicative of RNA degradation, was visible in some of the non-frozen samples. The extra quick-freezing step provides a simple and affordable method for preserving high-quality RNA, especially from tissue samples. Further comparisons can be made to determine whether the observed benefits extend to other tissue types or to quantitative polymerase chain reaction (qPCR) analysis in gene expression studies.

Indexed as

FrozenHomogenisationOptimisationRNA extractionTissue samples

Identifiers

PMID41542168
PMCPMC12803821

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.