Evidence map›Paper›PMID 41542055›Full record

ArticleResearch square2026

Sugar ABC transporter repertoires predict ecological dynamics in gut microbiome communities.

Harsh Maan, William Jogia, Caichen Duan, Fanny Matheis, Eric K Nishimoto, Chenzhen Zhang, Alexis P Sullivan, Jonas Schluter

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Harsh MaanInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.
William JogiaInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.ORCID https://orcid.org/0009-0000-5513-2375
Caichen DuanInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.
Fanny MatheisInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.
Eric K NishimotoInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.
Chenzhen ZhangInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.
Alexis P SullivanInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.ORCID https://orcid.org/0000-0001-9296-8112
Jonas SchluterInstitute for Systems Genetics, NYU Langone Health Grossman School of Medicine, New York City, NY, USA.ORCID https://orcid.org/0000-0002-6214-9367

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
A prospective evaluation of the gut microbiome as a mediator of lymphoma treatment outcome and systemic immunityR01CA269617 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Catherine Sibyl Diefenbach · 2022 to 2026
$3.5M
The unleashed microbiome of cancer patients as a discovery platform for rational microbiome engineeringDP2AI164318 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SCHLUTER, JONAS · 2021 to 2025
$2.5M
NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA269617NIAID NIH HHS DP2 AI164318
6 · The paper itself

Abstract

The gut microbiome plays a central role in human health, but modern diets and lifestyles alter its composition. Increased sugar consumption is a hallmark of modern diets, yet its impact on the microbiome remains poorly understood. Here, we combine comparative genomics, experiments, and longitudinal human diet-microbiome records to show that the response of the microbiome to dietary sugars is explained by the carriage of sugar ABC (ATP-binding cassette) transporters. Bacteria encoding these transporters exhibit enhanced growth and consistently outcompete others in both monocultures and complex consortia across contexts. Targeted deletion of sugar transporter genes in

Identifiers

PMID41542055
PMCPMC12803351

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.