Evidence map›Paper›PMID 41540336›Full record

ArticleBMC plant biology2026

Multiple omics analysis reveals the response mechanism of tobacco seedlings to different magnesium concentrations.

Jun Wang, Xiaohui Yu, Tao Yu

Abstract read
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Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Jun WangCollege of Plant Protection, Shandong Agricultural University, Tai'an, 271018, China.
Xiaohui YuCollege of Plant Protection, Shandong Agricultural University, Tai'an, 271018, China.
Tao YuCollege of Plant Protection, Shandong Agricultural University, Tai'an, 271018, China. yutaosdnd@163.com.

Funding

the Foundation of Shandong Province Modern Agricultural Technology System SDAIT-25-01
6 · The paper itself

Abstract

backgroundMagnesium is an essential macronutrient for tobacco (Nicotiana tabacum L.) growth, as it participates in chlorophyll synthesis, photosynthesis, and enzyme activation. However, the molecular mechanisms underlying tobacco’s dynamic response to varying magnesium concentrations remain unclear. This study combined physiological, transcriptomic, and metabolomic analyses to explore the adaptive strategies of tobacco seedlings under complete magnesium deficiency (CK), deficient, optimal (T3, 4 mmol/L), excess, and toxic magnesium conditions.

resultsMagnesium deficiency/excess induced oxidative stress and inhibited growth, while T3 promoted agronomic traits. Transcriptomics of the CK and T3 treatment groups showed: 7 days (5,450 DEGs, 51.6% up/48.4% down), 15 days (15,582 DEGs, 49.9% up/50.1% down), 30 days (11,574 DEGs, 44.9% up/55.1% down). Genes highly sensitive to magnesium concentration included LOC107825700, LOC107808263, and LOC107759348 (consistently upregulated under optimal magnesium) and LOC107795938, LOC107785922 (significantly downregulated under magnesium deficiency). KEGG enrichment analysis showed that these DEGs were mainly enriched in photosynthesis, tricarboxylic acid (TCA) cycle, sucrose-galactose metabolism, amino acid biosynthesis, and nucleotide metabolism pathways. Metabolomic of the CK and T3 treatment groups results confirmed that optimal magnesium upregulated key metabolites such as fructose 6-phosphate, galactose, α-ketoglutaric acid, and guanosine, while suppressing purine and 2-aminopurine accumulation. Additionally, sucrose synthase (LOC107828804), arginine decarboxylase (LOC107773487), and nucleotide metabolism-related genes (LOC107773465) were identified as core regulatory genes for magnesium response.

conclusionsThis study reveals that tobacco adapts to magnesium concentration changes through synergistic regulation of “photosynthesis-TCA cycle-sucrose-amino acid-nucleotide” metabolic networks. The identified magnesium-sensitive genes and key pathways provide a theoretical basis for breeding magnesium-deficiency-tolerant tobacco varieties and optimizing magnesium fertilizer application in tobacco production.

Indexed as

MagnesiumNicotianaSeedlingsGene Expression ProfilingGene Expression Regulation, PlantMetabolomicsMultiomicsTranscriptomeMagnesiumCarbon and nitrogen metabolismMagnesiumMetabolomics analysisPhotosynthesisTobaccoTranscriptomics analysis

Identifiers

PMID41540336
PMCPMC12888412

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.