Evidence map›Paper›PMID 41538757›Full record

ArticleJCO precision oncology2026

Functional Precision Medicine Using MicroOrganoSpheres for Treatment Response Prediction in Advanced Colorectal Cancer.

Roán Gobits, Nikolai Schleußner, Gavin R Oliver, Michael Rutenberg Schoenberg, António Miguel de Jesus Domingues, Pavan Ramkumar, Sylvia W F Suen, Mandy P M Koomen, Francesca Paolucci, Kilian Martens and 28 more

Abstract read
In one paragraph

Article in JCO precision oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Roán GobitsXilis B.V., Utrecht, the Netherlands.ORCID 0000-0002-0644-0985
Nikolai SchleußnerCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0009-0001-3549-5600
Gavin R OliverXilis Inc, Durham, NC.
Michael Rutenberg SchoenbergXilis Inc, Durham, NC.
António Miguel de Jesus DominguesXilis B.V., Utrecht, the Netherlands.ORCID 0000-0002-1803-1863
Pavan RamkumarXilis Inc, Durham, NC.
Sylvia W F SuenXilis B.V., Utrecht, the Netherlands.
Mandy P M KoomenXilis B.V., Utrecht, the Netherlands.
Francesca PaolucciXilis B.V., Utrecht, the Netherlands.
Kilian MartensXilis B.V., Utrecht, the Netherlands.
Aitana Guiseris MartinezCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0009-0007-7542-7112
Julia VolkCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.
Carolin ArtmannCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.
Manuel MastelCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0009-0007-6886-4170
Kyanna S OuyangJunior Research Group Epithelium Microbiome Interactions (EMIL), German Cancer Research Center, Heidelberg, Germany.ORCID 0009-0007-1198-1405
Matthias KloorDepartment of Applied Tumor Biology, Institute of Pathology, Heidelberg University Hospital, Heidelberg, Germany.
Eric Daniel BankaitisXilis Inc, Durham, NC.ORCID 0009-0006-2032-7651
Hayden Eric StoubXilis Inc, Durham, NC.
Jens PuschhofJunior Research Group Epithelium Microbiome Interactions (EMIL), German Cancer Research Center, Heidelberg, Germany.ORCID 0000-0001-9275-4034
Kevin BrownXilis Inc, Durham, NC.ORCID 0009-0000-7139-2185
Sebastian PretzerXilis Inc, Durham, NC.ORCID 0009-0009-0442-877X
Daniel A NelsonXilis Inc, Durham, NC.
Eric StrumingerXilis Inc, Durham, NC.ORCID 0009-0001-1459-348X
Amelia ZessinXilis Inc, Durham, NC.ORCID 0009-0003-5855-9544
Amanda BrownXilis Inc, Durham, NC.
Corey EvansXilis Inc, Durham, NC.
Daniel YetskoXilis Inc, Durham, NC.ORCID 0009-0001-1551-0607
Mackenzie HarringtonXilis Inc, Durham, NC.
Gabriel SalgDepartment of General, Visceral and Transplant Surgery, University Hospital Heidelberg, Heidelberg, Germany.ORCID 0000-0002-3964-3527
Martin SchneiderDepartment of General, Visceral and Transplant Surgery, University Hospital Heidelberg, Heidelberg, Germany.
Thomas SchmidtDepartment of General, Visceral and Transplant Surgery, University Hospital Heidelberg, Heidelberg, Germany.ORCID 0000-0002-7166-3675
Elena HelmanXilis Inc, Durham, NC.ORCID 0009-0007-4096-9261
Dennis PlenkerXilis Inc, Durham, NC.
Carlton BarnettXilis Inc, Durham, NC.ORCID 0000-0002-5686-8357
Ryan T JonesXilis Inc, Durham, NC.
Bruno KöhlerDepartment of Medical Oncology, National Center for Tumor Diseases (NCT) Heidelberg, Heidelberg University Hospital, Heidelberg, Germany.
Else DriehuisXilis B.V., Utrecht, the Netherlands.ORCID 0000-0002-4512-3106
Rene JackstadtCancer Progression and Metastasis Group, German Cancer Research Center (DKFZ) and DKFZ-ZMBH Alliance, Heidelberg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeNeoadjuvant chemotherapy is a key component of curative treatment in advanced colorectal cancer (CRC). However, 30%-40% of patients show progression on treatment, underscoring the need for predictive tools to guide up-front treatment selection. Scalable and reproducible methods for patient stratification remain limited. MicroOrganoSpheres (MOS) are droplet-encapsulated 3D tumor models that allow for high-throughput functional drug testing. Here, we evaluate the potential of tumor-derived MOS to predict response to chemotherapy in patients with CRC.

methodsMOS droplets were generated from 37 primary and/or metastatic tumor samples collected from 21 patients. MOS response to chemotherapy was quantified using AI-based imaging analysis and compared with clinical response (RECIST/disease-free survival [DFS]) and lesion-specific outcomes (pathologic response/percent tumor volume change).

resultsMOS chemoprediction assay showed high reproducibility (coefficients of variation ≤ 2.5%). MOS drug sensitivity recapitulated patient response with 83% accuracy in the full sample cohort and 100% accuracy when derived from primary tumors. Patients with sensitive MOS showed longer DFS. Individual MOS analysis revealed preservation of intratumor heterogeneity in vitro and enabled identification of drug-resistant clones.

conclusionMOS technology offers a scalable and robust functional precision medicine platform with potential to guide clinical decision making in CRC. The platform accurately predicts patient response to chemotherapy and provides insights into intrapatient and intratumor heterogeneity.

Indexed as

Colorectal NeoplasmsPrecision MedicineFemaleHumansMaleNeoadjuvant TherapyTreatment Outcome

Identifiers

PMID41538757
PMCPMC12834292

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.