Evidence map›Paper›PMID 41537582›Full record

ArticlemSphere2026

Senga Robertson, Alexandros Mosca, Saira Ashraf, Aileen Corral, Rodrigo Alegria Terrazas, Catherine Arnton, Peter Thorpe, Jenny Morris, Pete E Hedley, Giulia Babbi and 14 more

Abstract read
In one paragraph

Article in mSphere, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. mSphere · 2026
    Article
  2. Article
4 · The record

Corrections and comments

  • Commented on by
    2026
5 · Who and what money

Authors and funding

24 authors.

Senga Robertson *Plant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0001-5907-714X
Alexandros Mosca *Plant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0001-8352-8457
Saira AshrafPlant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Aileen CorralPlant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Rodrigo Alegria TerrazasPlant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0002-3005-7273
Catherine ArntonPlant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0009-0001-2775-8060
Peter ThorpeComputational Biology, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0001-8572-4654
Jenny MorrisCell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom.
Pete E HedleyCell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom.
Giulia BabbiDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.ORCID 0000-0002-9816-4737
Castrense SavojardoDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.ORCID 0000-0002-7359-0633
Pier Luigi MartelliDepartment of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy.ORCID 0000-0002-0274-5669
Frederik Duus MøllerResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Lyngby, Denmark.ORCID 0000-0003-0655-1551
Hanne Nørgaard NielsenResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Lyngby, Denmark.ORCID 0009-0005-7327-0241
Pimlapas LeekitcharoenphonResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Lyngby, Denmark.ORCID 0000-0002-5674-0142
Frank M AarestrupResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Lyngby, Denmark.ORCID 0000-0002-7116-2723
Rashi HalderLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg.
Cedric C LacznyLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg.ORCID 0000-0002-1100-1282
Paul WilmesLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg.ORCID 0000-0002-6478-2924
Laura PietrantonioMS Biotech, Larino, Campobasso, Italy.
Pardo Di CilloMS Biotech, Larino, Campobasso, Italy.
Vittoria CataraDepartment of Agriculture, Food and Environment, University of Catania, Catania, Italy.ORCID 0000-0001-8076-258X
James AbbottComputational Biology, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0001-7701-4249
Davide BulgarelliPlant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom.ORCID 0000-0002-2020-6642

Funding

Biotechnology and Biological Sciences Research Council 2734186Horizon 2020 Framework Programme 818290
6 · The paper itself

Abstract

Tomato is a staple crop and an excellent model to study host-microbiota interactions in the plant food chain. In this study, we describe a "lab-in-the-field" approach to investigate the microbiota of field-grown tomato plants. High-throughput amplicon sequencing revealed a three-microhabitat partition, phyllosphere, rhizosphere, and root interior, differentiating host-associated communities from the environmental microbiota. An individual bacterium, classified as

Indexed as

AcinetobacterMicrobiotaSolanum lycopersicumHigh-Throughput Nucleotide SequencingMetagenomeMetagenomicsPlant RootsRhizosphereSoil MicrobiologyAMRfood-chain microbiotametagenomicsOne Healthtomato

Identifiers

PMID41537582
PMCPMC12931273

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.