Evidence map›Paper›PMID 41537347›Full record

ArticleHaematologica2026

Evaluation of acute myeloid leukemia using genomic proximity mapping-based next generation cytogenomics.

Cecilia C S Yeung, Stephen M Eacker, Olga Sala-Torra, Mary Wood, Lan Beppu, David W Woolston, Ivan Liachko, Maika Malig, Derek Stirewalt, Alexander Muratov and 2 more

Abstract read
In one paragraph

Article in Haematologica, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Cecilia C S YeungTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA, USA; Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, WA. cyeung@fredhutch.org.
Stephen M EackerPhase Genomics, Seattle, WA.
Olga Sala-TorraTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA.
Mary WoodPhase Genomics, Seattle, WA.
Lan BeppuTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA.
David W WoolstonTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA.
Ivan LiachkoPhase Genomics, Seattle, WA.
Maika MaligPhase Genomics, Seattle, WA.
Derek StirewaltTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA, USA; Department of Medicine, University of Washington Medical Center, Seattle, WA.
Alexander MuratovPhase Genomics, Seattle, WA.
Min FangTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA, USA; Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, WA.
Jerald RadichTranslational Science and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, WA, USA; Department of Medicine, University of Washington Medical Center, Seattle, WA.

Funding

ITSC for Leukemia: Novel Molecular strategies for NCTN "Individualized" TherapiesUG1CA233338 · NCI · UNIVERSITY OF CINCINNATI · PI BYRD, JOHN C. · 2019 to 2025
$4.5M
Understanding and predicting relapse in acute myeloid leukemiaR01CA175008 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI RADICH, JERALD PATRICK · 2013 to 2023
$3.9M
AI-based AML risk stratification using next generation cytogenomicsR44CA278140 · NCI · PHASE GENOMICS, INC. · PI EACKER, STEPHEN MATTHEW · 2023 to 2024
$2.0M
NCI NIH HHS R01 CA175008NCI NIH HHS R44 CA278140NCI NIH HHS UG1 CA233338
6 · The paper itself

Abstract

Cytogenetic analysis encompasses a suite of standard-of-care diagnostic testing methods that is applied routinely in cases of acute myeloid leukemia (AML) to assess chromosomal changes that are clinically relevant for risk classification and treatment decisions. In this study, we assess the use of Genomic Proximity Mapping® (GPM) for cytogenomic analysis of AML diagnostic specimens for detection of cytogenetic risk variants included in the European Leukemia Network (ELN) risk stratification guidelines. Archival patients' samples (N=48) from the Fred Hutchinson Cancer Center Leukemia Bank with historical clinical cytogenetic data were processed for GPM and analyzed with the CytoTerra cloud-based analysis platform. GPM showed 100% concordance for all specific variants that have associated impacts on risk stratification as defined by ELN 2022 criteria and 78% concordance when considering all variants reported by the Cytogenetics Laboratory at Fred Hutchinson Cancer Center. Notably, the percentage of blasts (ranging from 5-96%) did not have a clear effect on the ability to detect these variants. In two cases, GPM identified a recurrent inv(9)(p13.3p13.1). These findings demonstrate GPM's effectiveness for the evaluation of known AML-associated risk variants and a source for biomarker discovery.

Indexed as

Chromosome MappingGenomicsHigh-Throughput Nucleotide SequencingLeukemia, Myeloid, AcuteAgedChromosome AberrationsCytogenetic AnalysisFemaleHumansMaleMiddle Aged

Identifiers

PMID41537347
PMCPMC13317845

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.