Evidence map›Paper›PMID 41535069›Full record

ArticleGenome research2026

Quantifying pathological progression from single-cell transcriptomic data with scPSS.

Samin Rahman Khan, M Saifur Rahman, M Sohel Rahman, Md Abul Hassan Samee

Abstract read
In one paragraph

Article in Genome research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Samin Rahman KhanInstitute of Information and Communication Technology, Bangladesh University of Engineering and Technology, Dhaka-1000, Bangladesh.ORCID 0000-0002-6429-8569
M Saifur RahmanDepartment of Computer Science and Engineering, Bangladesh University of Engineering and Technology, Dhaka-1000, Bangladesh; msrahman@cse.buet.ac.bd samee@bcm.edu.ORCID 0000-0002-9887-4456
M Sohel RahmanDepartment of Computer Science and Engineering, Bangladesh University of Engineering and Technology, Dhaka-1000, Bangladesh.ORCID 0000-0001-9419-6478
Md Abul Hassan SameeDepartment of Computer Science and Engineering, Bangladesh University of Engineering and Technology, Dhaka-1000, Bangladesh; msrahman@cse.buet.ac.bd samee@bcm.edu.ORCID 0000-0002-7472-1156

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The surge in single-cell data sets and reference atlases has enabled the comparison of cell states across conditions, yet a gap persists in quantifying pathological shifts from healthy cell states. To address this gap, we introduce

Indexed as

Gene Expression ProfilingSingle-Cell AnalysisTranscriptomeDisease ProgressionHumansSingle-Cell Gene Expression Analysis

Identifiers

PMID41535069
PMCPMC12863187

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.