Evidence map›Paper›PMID 41533195›Full record

ArticleJournal of molecular modeling2026

The use of an interpretable machine-learning approach to disclose the molecular assemblage on melting transition.

Gonçalo V S M Carrera, Carlos E S Bernardes, Ana V M Nunes, Teresa Casimiro, João Sotomayor, Ana Aguiar-Ricardo

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Article in Journal of molecular modeling, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Gonçalo V S M CarreraLAQV-REQUIMTE, NOVA School of Science and Technology, 2829-516, Caparica, Portugal. goncalo.carrera@gmail.com.ORCID http://orcid.org/0000-0001-6978-3603
Carlos E S BernardesCentro de Química Estrutural, Institute of Molecular Sciences, Departamento de Química E Bioquímica, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016, Lisbon, Portugal. cebernardes@ciencias.ulisboa.pt.ORCID http://orcid.org/0000-0003-1490-9728
Ana V M NunesLAQV-REQUIMTE, NOVA School of Science and Technology, 2829-516, Caparica, Portugal.ORCID http://orcid.org/0000-0001-9928-1903
Teresa CasimiroLAQV-REQUIMTE, NOVA School of Science and Technology, 2829-516, Caparica, Portugal.ORCID http://orcid.org/0000-0001-9405-6221
João SotomayorLAQV-REQUIMTE, NOVA School of Science and Technology, 2829-516, Caparica, Portugal. sotomayor@fct.unl.pt.ORCID http://orcid.org/0000-0002-4589-0591
Ana Aguiar-RicardoLAQV-REQUIMTE, NOVA School of Science and Technology, 2829-516, Caparica, Portugal.ORCID http://orcid.org/0000-0002-2193-1440

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextThe access to the molecular assemblage on the melting transition is fundamental to phase-change material's design, particularly when applied to renewable and intermittent energy sources, and the investigation of physical/chemical/biological processes. The development of new methods to obtain this information is, consequently, highly desired. This framework is fertile ground for the establishment of machine learning-based models with both predictive and interpretable profiles. However, such models are difficult to establish. This work describes the implementation of a Random Forest interpretable approach set on the specific tree paths followed by a given chemical system (molecule) for the relationship between its descriptors/melting point value. The descriptors involve all combinations of atom pairs of a generical molecular chemical system. The combined use of Random Forest molecule's specific tree paths and descriptor concept enables the built model the capacity to highlight the most important combinations of pairs of atoms/interactions inherent to molecular assembly on melting stage. As proof of concept, this procedure was applied to investigate the organization of 2-(2,4-dichlorophenoxy)acetic acid (2,4-D) molecules at their melting point, with the results validated with thermo-regulated FTIR and computational chemistry approaches.

methodThis approach combines the Random Forest algorithm and atom-pair-based descriptor's pattern, set for a generical molecule, in order to find a straightforward structure-property relationship. The unique tree paths followed by a given molecule highlight new specific measures addressing a causality relationship involving its descriptors and the melting point profile. This machine learning approach was validated with thermo-regulated FTIR, interaction energies, and molecular dynamics techniques.

Indexed as

3D molecular assemblageMelting pointMolecule-specific measuresMOLMAP descriptorsRandom ForestTree paths

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.