Evidence map›Paper›PMID 41532790›Full record

ArticleJournal of bacteriology2026

CRISPR interference in a

William D Cutts, Aidan W Flanagan, Brice K Gorman, Audrey Sweten, Bryan J Estrada, Vishwas N Subash, Benjamin T Klemp, Kathryn N Seely, Austin D Sandobal, Katelin R Stilen and 8 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. A cross-strain CRISPRi sgRNA library forMicrobiology resource announcements · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

William D CuttsDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.ORCID 0000-0002-7881-2127
Aidan W FlanaganDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.ORCID 0000-0002-3298-1742
Brice K GormanDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.
Audrey SwetenDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.ORCID 0009-0000-6522-5380
Bryan J EstradaDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Vishwas N SubashDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Benjamin T KlempDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Kathryn N SeelyDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Austin D SandobalDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Katelin R StilenDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Taksh VaghelaDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Areebah MehvishDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.
Jacob F WoodDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.
Alexus M GovertDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.
Kristin E HobsonDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.
Gideon H HillebrandDepartment of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Thomas A HoovenDepartment of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.ORCID 0000-0003-1959-186X
Brandon J KimDepartment of Molecular and Cell Biology, University of Texas at Dallas, Dallas, Texas, USA.ORCID 0000-0003-0476-8028

Funding

Group B Streptococcus surface determinants of neonatal intestinal colonization and infectionR01AI182835 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Thomas A Hooven · 2024 to 2026
$1.6M
Signal transduction, metabolic shifts, and host interactions during group B Streptococcus infectionR01AI177991 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Thomas A Hooven · 2024 to 2026
$1.4M
Impairment of the cerebral vasculature during bacterial meningitisR15NS131921 · NINDS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI CORRELL, ROBERT NATHAN · 2023 to 2023
$447k
National Institute of Allergy and Infectious Diseases R01AI177991National Institute of Allergy and Infectious Diseases R01AI182835National Institute of Allergy and Infectious Diseases R03AI185593National Institute of Allergy and Infectious Diseases R21AI178067NIAID NIH HHS R01 AI177991NIAID NIH HHS R01 AI182835NINDS NIH HHS R15NS131921
6 · The paper itself

Abstract

Group B Streptococcus (GBS), a common colonizer of the human genital and gastrointestinal tracts, is a leading cause of neonatal bacterial meningitis, which can lead to severe neurological complications. The hypervirulent serotype III, sequence type 17 (ST-17) strain COH1 is strongly associated with late-onset disease due to its unique set of virulence factors. However, genetic manipulation of ST-17 strains remains challenging, limiting the ability to study key pathogenic genes. In this study, we developed a CRISPR interference (CRISPRi) system utilizing an endogenous catalytically inactivated Cas9 (dCas9) in the COH1 strain, enabling targeted and tunable gene expression knockdown. We confirmed the efficacy of this system through hemolysis assays, qPCR transcriptional analysis, and IMPORTANCE: Group B Streptococcus (GBS) remains the world's leading cause of neonatal meningitis. GBS-host interactions at the blood-brain barrier (BBB) are dependent on bacterial factors, including surface factors and two-component systems. Multi-locus sequence type 17 (ST-17) GBS strains are highly associated with neonatal meningitis, and these strains harbor many virulence factors for infection at the BBB. Historically, these factors have been studied using traditional knockout mutagenesis, which has been challenging in the most common ST-17 lab strain, COH1. This study utilizes CRISPR interference (CRISPRi) to generate rapid expression knockdown. This study validates a CRISPRi-enabled COH1 dCas9 strain as a versatile tool for probing GBS pathogenesis at the BBB.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsStreptococcus agalactiaeBlood-Brain BarrierEndothelial CellsGene Knockdown TechniquesHumansStreptococcal InfectionsVirulenceVirulence FactorsVirulence FactorsCRISPRGroup B Streptococcus

Identifiers

PMID41532790
PMCPMC12918731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.