Evidence map›Paper›PMID 41527326›Full record

ArticleAlcohol, clinical & experimental research2026

SWI/SNF complexes modulate gene expression and the development of physical dependence to ethanol.

Laura D Mathies, GinaMari G Blackwell, Andrew G Davies, Jill C Bettinger

Abstract read
In one paragraph

Article in Alcohol, clinical & experimental research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. AlteredeNeuro · 2026
    Article
  2. Advances in drug addiction research usingFrontiers in cell and developmental biology · 2026
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laura D MathiesDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, Virginia, USA.
GinaMari G BlackwellDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, Virginia, USA.
Andrew G DaviesDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, Virginia, USA.
Jill C BettingerDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, Virginia, USA.

Funding

Project 5 - Genetic architecture of alcohol use disorder using cross-trait genetic correlations and public next-generation sequencing studiesP50AA022537 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI MICHAEL F MILES · 2014 to 2026
$19.6M
Regulation of responses to alcohol by the SWI/SNF chromatin remodeling complexR01AA024482 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI BETTINGER, JILL C, MATHIES, LAURA · 2016 to 2020
$1.7M
NIAAA NIH HHS P50 AA022537NIAAA NIH HHS R01 AA024482NIH HHS P50 AA022537NIH HHS R01 AA024482
6 · The paper itself

Abstract

backgroundLong exposure to ethanol causes the development of physical dependence, which causes withdrawal symptoms when ethanol is removed. We exploited the rapid development of physical dependence in Caenorhabditis elegans (C. elegans) to examine the ethanol-induced transcriptional changes that correspond with physical dependence and withdrawal effects.

methodsAfter an 18-h exposure to an intoxicating concentration of ethanol, we observe the development of physical dependence; withdrawal from ethanol causes an increase in their preference for thicker parts of a bacterial lawn, a behavior we term withdrawal-induced bordering (WIB). We performed transcriptional analysis to identify genes whose expression changes correlate with WIB.

resultsWe found that WIB is transient, resolving within 6 h of removal from ethanol, suggesting it is driven by short-term gene expression changes. We identified 1870 genes with differential expression immediately after ethanol exposure but not after 6 h of withdrawal; these are candidate mediators of WIB. We found that the SWI/SNF chromatin remodeling complex, known to be important in the response to acute ethanol exposure, is required for normal WIB. Loss of swsn-9 attenuated but did not eliminate WIB, suggesting that there are swsn-9-dependent and swsn-9-independent components of WIB. Regulation of 1031 ethanol-responsive genes requires swsn-9. WIB phenocopies reduced npr-1 activity, and two genes implicated in the npr-1 signaling pathway, jmjc-1 and dod-24, were transiently regulated after extended ethanol exposure. dod-24 mutants have attenuated WIB.

conclusionsExtended exposure to ethanol causes the development of transient physical dependence in C. elegans, and the SWI/SNF complex is involved in this process. Genes involved in fatty acid metabolism were regulated over the WIB timecourse, and dod-24, which is involved in temperature sensitivity, is required for normal WIB. Together, these results suggest a model in which modulation of lipid membrane composition may be one mechanism for the development of physical dependence on ethanol.

Indexed as

AlcoholismCaenorhabditis elegans ProteinsChromosomal Proteins, Non-HistoneEthanolGene Expression RegulationTranscription FactorsAnimalsCaenorhabditis elegansSubstance Withdrawal SyndromeCaenorhabditis elegans ProteinsChromosomal Proteins, Non-HistoneEthanolSWI-SNF-B chromatin-remodeling complexTranscription Factorsalcohol dependencealcohol withdrawalCaenorhabditis elegansdifferential gene expressionSWI/SNF chromatin remodeling complex

Identifiers

PMID41527326
PMCPMC12796780

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.