Evidence map›Paper›PMID 41522492›Full record

ArticleJournal of oral microbiology2026

Cross-sectional comparative shotgun metagenomic analysis of the subgingival resistome in healthy subjects and patients with periodontitis from four countries.

A Arredondo, G Àlvarez, S Isabal, W Teughels, I Laleman, M J Contreras, L Isbej, E Huapaya, G Mendoza, C Mor and 3 more

Abstract read
In one paragraph

Article in Journal of oral microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

A ArredondoDepartment of Microbiology, Dentaid Research Center, Barcelona, Spain.ORCID https://orcid.org/0000-0003-4459-1300
G ÀlvarezDepartment of Microbiology, Dentaid Research Center, Barcelona, Spain.
S IsabalDepartment of Microbiology, Dentaid Research Center, Barcelona, Spain.
W TeughelsDepartment of Oral Health Sciences, KU Leuven & Dentistry, University Hospitals Leuven, Leuven, Germany.
I LalemanDepartment of Oral Health Sciences, KU Leuven & Dentistry, University Hospitals Leuven, Leuven, Germany.
M J ContrerasSchool of Dentistry, Faculty of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile.
L IsbejSchool of Dentistry, Faculty of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile.
E HuapayaDepartment of Periodontology, School of Dentistry, Universidad Científica del Sur, Lima, Peru.
G MendozaDepartment of Periodontology, School of Dentistry, Universidad Científica del Sur, Lima, Peru.
C MorDepartment of Periodontology, Universitat Internacional de Catalunya, Barcelona, Spain.
J NartDepartment of Periodontology, Universitat Internacional de Catalunya, Barcelona, Spain.
V BlancDepartment of Microbiology, Dentaid Research Center, Barcelona, Spain.
R LeónDepartment of Microbiology, Dentaid Research Center, Barcelona, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The oral cavity is a known reservoir of antibiotic resistance genes (ARGs), but little is known about their subgingival distribution across health states and regions. Objective: This study aimed to characterize and compare the subgingival resistome and mobile genetic elements (MGEs) in healthy subjects (HS) and periodontitis patients (PP) from Belgium, Chile, Peru and Spain. Design: Subgingival samples pooled from the deepest site of each quadrant of 40 HS and 40 PP were analyzed via shotgun metagenomic sequencing. After human DNA depletion, the microbial composition was assessed with MetaPhlAn 4.0; ARGs were identified using MEGAHIT and AMRFinderPlus; and MGEs with MGEfinder. Results: ARG richness was significantly higher in PP (mean 3.98) than in HS (2.15). PP from Peru showed more ARGs than HS from Chile and Spain. In total, 28 ARGs were found, conferring resistance to eight antibiotic classes. β-lactam, tetracycline and aminoglycoside resistance were more abundant in PP. Macrolide resistance was lower in Chilean samples than in Peruvian and Spanish ones. Additionally, 99 MGE-associated genes were detected, with 16 differing by diagnosis and 78 by country. Conclusions: Subgingival resistome profiles vary significantly by periodontal status and geography, underscoring the influence of clinical and regional factors on antimicrobial resistance in the oral microbiome.

Indexed as

Antibiotic resistance microbialdental Plaquemetagenomicsmicrobiomemulticenter studiesperiodontitis

Identifiers

PMID41522492
PMCPMC12781940

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.